Non-Coding RNA Search

Ss1.1-Pig2-128L10.5

Sequence:


               
               GCAGTGGTGTAGGCCCGCGGCTACAGCTCCAATTTGACACCTAGCCTGGGGACCACCATA
TGCCCGGGTGTGGCTCTAAAAAGACAAAAAAGACCAAAAAAAAAAGTCATACACCTGAAG
TGGTGAGCTCCCTGTCATTAGAAGTATGCAATCAGGAGTTTTGTGCTCTCTTGGCAGGAT
CACTACCAGAGCCTGGGTTAGCCCTTCAAAGTCCCTTAGTGGGACATTCTGAGTCATGGG
GCGCCTTCCTTGGGAGGTCTCAAACCAGAGGTATCCCACATTTCTGCAACCTTGAGGGAC
CCAAGTAGGAGAAAAGGGTGACTTTTCTCTCGGCTTCTGCCATGAGAAGCCAAGCAGCTT
CCTGCCCCTCCCCCACCAAACGTGGGTGAAGATCCCTCCCCAGGAATGCTGACTTTGTTC
TGCACACAGGAGGGCCCAAGGCTGGGGAGGAGAGCTGCACCTGATTCAAAGGGAGAGAAA
GCAGATGAGACCACTTGGCACCCCCTGGTGGCTGTCCCTGGTTTAATGTGTGTGAAAGGC
TGGCCTCTGGCCCTTCAGCTGGGTCATGAGAGGGGCGTCCCTGAGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTGGTGTAGGCCCGCGGCTACAGCTCCAATTTGACACCTAGCCTGGGGACCACCATA
TGCCCGGGTGTGGCTCTAAAAAGACAAAAAAGACCAAAAAAAAAAGTCATACACCTGAAG
TGGTGAGCTCCCTGTCATTAGAAGTATGCAATCAGGAGTTTTGTGCTCTCTTGGCAGGAT
CACTACCAGAGCCTGGGTTAGCCCTTCAAAGTCCCTTAGTGGGACATTCTGAGTCATGGG
GCGCCTTCCTTGGGAGGTCTCAAACCAGAGGTATCCCACATTTCTGCAACCTTGAGGGAC
CCAAGTAGGAGAAAAGGGTGACTTTTCTCTCGGCTTCTGCCATGAGAAGCCAAGCAGCTT
CCTGCCCCTCCCCCACCAAACGTGGGTGAAGATCCCTCCCCAGGAATGCTGACTTTGTTC
TGCACACAGGAGGGCCCAAGGCTGGGGAGGAGAGCTGCACCTGATTCAAAGGGAGAGAAA
GCAGATGAGACCACTTGGCACCCCCTGGTGGCTGTCCCTGGTTTAATGTGTGTGAAAGGC
TGGCCTCTGGCCCTTCAGCTGGGTCATGAGAGGGGCGTCCCTGAGGGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               193-345, + strand, RNAz p=0.95752

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               193-345, + strand, RNAz p=0.95752

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               114-524, gnl|bosTau2|chr5 (67388895-67388487)
               

               
               114-524, gnl|Hg17|chr22 (36291562-36291968)
               

               
               114-524, gnl|Mm7|chr15 (78934567-78934956)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-524, gnl|bosTau2|chr5 (67388895-67388487)
               

               
               114-524, gnl|Hg17|chr22 (36291562-36291968)
               

               
               114-524, gnl|Mm7|chr15 (78934567-78934956)

	114-524, gnl\|bosTau2\|chr5 (67388895-67388487)
	114-524, gnl\|Hg17\|chr22 (36291562-36291968)
	114-524, gnl\|Mm7\|chr15 (78934567-78934956)