Ss1.1-Pig2-129H02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTGTACACCGCATAGTTCAGCAGGATCCTCCTCATGCTCTCCACGTTGGGATTGCCTTC GCCTCGAAAGAACTGGTTGCTGCGATCTGTCCGGACCACATCCTTGTCCACGGTGAACTG CACGTTTCGCCAGAAGGCTCTGTGCTCTTTCCCGGGTCATGGAGAGCCTCTTCTGCTGGA TCTCGGCGTACTCCTTTCTCTTCTGCACCCGCAGCGCCTCCCTCTCCTCCGACGTCGACT CGTGGCTGTAATAACGCAGCAGGAAGGGCCAGACCTCCCCCCGGATTGACACATCAATGC CGCCGAAGAAAATGGCCTGGCGCAGCTTGTACTCCTCCTCCACCTGGCCCAGCGCGTTCA GGTGGCGGAGCCAGGCCGCCACGTCCAGCCTTCGGTACAGGCTCTCCTCGGGGTGCGTCT CGGACGACGGCAGTTTGGGACGCCGGATGGAGAATTGCATGCACGTCTTCTCGTCGGCGA CCTGGTCTTTGAGGTGCGTCTCTGCACAGTATTTCCACTGCTGAAGCACATCAGGCAGCT TGTCCAGGCCACCGTGGTGGAAGTGGAAGACTTTGTACTGGCTCTCCCGGCTGGCAACGA CCAGCTGGCCGCTGGTGCAGGCCTCATCGCTGAAGAAGAGGCGGAGGGAGCGCATCTGCC CCAGGTCCACACGGAACACGCCACAGATCTGCTCCAGGGCGCACGCCCGCTGTGGCTCAT CCGACTGCAGGAGGCCGCTGCCGTCGGGGAACTGCAGGTGGGCATCGGTGCTGGACGGGG AGCAGCTCTCGCTTTCCAGGAACACCGAGCTGCTGCTCTCCGCGAGGACGGCGCTGATGG GCGAGAGGCAGAAGGGCGAAGAGAAGGCCTCCGAGTCCGAGTCAAAGGAGCTGGCCCTGC TCACGCCCTCGGCCGACAGCTCCAAGGAGCCCTCCTCCTCGCCCGCCTCGGGCCGCAGCT CCCGGCCCTCTTCCATCCCGTCCTGCGAACTGACCGCTGATAAGATTCCCGAGTCGCTGT GGACCGGCTGTGAGACGGGGAGGGGGCCATCTGTCCCCAGGCCGAGGGCCAGCTTCTCCC TGTCCTCGGACGAAGGGCTGGCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTGTACACCGCATAGTTCAGCAGGATCCTCCTCATGCTCTCCACGTTGGGATTGCCTTC GCCTCGAAAGAACTGGTTGCTGCGATCTGTCCGGACCACATCCTTGTCCACGGTGAACTG CACGTTTCGCCAGAAGGCTCTGTGCTCTTTCCCGGGTCATGGAGAGCCTCTTCTGCTGGA TCTCGGCGTACTCCTTTCTCTTCTGCACCCGCAGCGCCTCCCTCTCCTCCGACGTCGACT CGTGGCTGTAATAACGCAGCAGGAAGGGCCAGACCTCCCCCCGGATTGACACATCAATGC CGCCGAAGAAAATGGCCTGGCGCAGCTTGTACTCCTCCTCCACCTGGCCCAGCGCGTTCA GGTGGCGGAGCCAGGCCGCCACGTCCAGCCTTCGGTACAGGCTCTCCTCGGGGTGCGTCT CGGACGACGGCAGTTTGGGACGCCGGATGGAGAATTGCATGCACGTCTTCTCGTCGGCGA CCTGGTCTTTGAGGTGCGTCTCTGCACAGTATTTCCACTGCTGAAGCACATCAGGCAGCT TGTCCAGGCCACCGTGGTGGAAGTGGAAGACTTTGTACTGGCTCTCCCGGCTGGCAACGA CCAGCTGGCCGCTGGTGCAGGCCTCATCGCTGAAGAAGAGGCGGAGGGAGCGCATCTGCC CCAGGTCCACACGGAACACGCCACAGATCTGCTCCAGGGCGCACGCCCGCTGTGGCTCAT CCGACTGCAGGAGGCCGCTGCCGTCGGGGAACTGCAGGTGGGCATCGGTGCTGGACGGGG AGCAGCTCTCGCTTTCCAGGAACACCGAGCTGCTGCTCTCCGCGAGGACGGCGCTGATGG GCGAGAGGCAGAAGGGCGAAGAGAAGGCCTCCGAGTCCGAGTCAAAGGAGCTGGCCCTGC TCACGCCCTCGGCCGACAGCTCCAAGGAGCCCTCCTCCTCGCCCGCCTCGGGCCGCAGCT CCCGGCCCTCTTCCATCCCGTCCTGCGAACTGACCGCTGATAAGATTCCCGAGTCGCTGT GGACCGGCTGTGAGACGGGGAGGGGGCCATCTGTCCCCAGGCCGAGGGCCAGCTTCTCCC TGTCCTCGGACGAAGGGCTGGCGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 897-1013, - strand, RNAz p=0.599835 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 897-1013, - strand, RNAz p=0.599835 |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 167-320, gnl|bosTau2|chr19 (47086379-47086532) | |
| 167-320, gnl|canFam2|chr9 (4710676-4710504) | |
| 167-320, gnl|danRer3|chr14 (36330463-36330637) | |
| 167-320, gnl|dasNov1|scaffold_94191 (3072-2899) | |
| 167-320, gnl|fr1|chrUn (224042936-224043112) | |
| 167-320, gnl|galGal2|chr3_random (512154-511988) | |
| 167-320, gnl|hg17|chr17 (75538108-75538280) | |
| 167-320, gnl|Hg17|chr17 (75538110-75538263) | |
| 167-320, gnl|loxAfr1|scaffold_17535 (47763-47935) | |
| 167-320, gnl|mm7|chr11 (119265063-119265234) | |
| 167-320, gnl|Mm7|chr11 (119265064-119265217) | |
| 167-320, gnl|monDom2|scaffold_18 (10559465-10559637) | |
| 167-320, gnl|panTro1|chr19 (79225050-79225222) | |
| 167-320, gnl|rheMac2|chr16 (75396160-75396332) | |
| 167-320, gnl|rn3|chrUn (51982010-51982181) | |
| 167-320, gnl|tetNig1|chr3 (9172369-9172522) | |
| 167-320, gnl|xenTro1|scaffold_125 (43866-43700) | |
| 477-633, gnl|bosTau2|chr19 (47088115-47088271) | |
| 477-633, gnl|canFam2|chr9 (4708995-4708793) | |
| 477-633, gnl|danRer3|chr14 (36336288-36336442) | |
| 477-633, gnl|dasNov1|scaffold_94191 (1616-1441) | |
| 477-633, gnl|echTel1|scaffold_262896 (9885-9706) | |
| 477-633, gnl|fr1|chrUn (224043663-224043833) | |
| 477-633, gnl|galGal2|chr3_random (510093-509908) | |
| 477-633, gnl|hg17|chr17 (75539834-75540011) | |
| 477-633, gnl|Hg17|chr17 (75539839-75539995) | |
| 477-633, gnl|loxAfr1|scaffold_17535 (49481-49658) | |
| 477-633, gnl|mm7|chr11 (119266775-119266953) | |
| 477-633, gnl|Mm7|chr11 (119266780-119266936) | |
| 477-633, gnl|monDom2|scaffold_18 (10561495-10561672) | |
| 477-633, gnl|oryCun1|scaffold_166773 (4414-4588) | |
| 477-633, gnl|panTro1|chr19 (79226860-79227037) | |
| 477-633, gnl|rheMac2|chr16 (75397880-75398057) | |
| 477-633, gnl|rn3|chrUn (51983702-51983879) | |
| 477-633, gnl|tetNig1|chr3 (9173097-9173263) | |
| 477-633, gnl|xenTro1|scaffold_125 (41712-41513) | |
| 785-1099, gnl|bosTau2|chr19 (47139089-47139403) | |
| 785-1099, gnl|canFam2|chr9 (4663155-4662951) | |
| 785-1099, gnl|danRer3|chr14 (36358236-36358436) | |
| 785-1099, gnl|echTel1|scaffold_207808 (7085-6917) | |
| 785-1099, gnl|fr1|chrUn (224047129-224047330) | |
| 785-1099, gnl|galGal2|chr3_random (499461-499236) | |
| 785-1099, gnl|hg17|chr17 (75598549-75598753) | |
| 785-1099, gnl|Hg17|chr17 (75598556-75598870) | |
| 785-1099, gnl|mm7|chr11 (119317811-119318015) | |
| 785-1099, gnl|Mm7|chr11 (119317818-119318132) | |
| 785-1099, gnl|monDom2|scaffold_18 (10643291-10643525) | |
| 785-1099, gnl|oryCun1|scaffold_62063 (1089-1263) | |
| 785-1099, gnl|panTro1|chr19_random (55401815-55401611) | |
| 785-1099, gnl|rheMac2|chr16 (75456838-75457042) | |
| 785-1099, gnl|rn3|chrUn (52033921-52034125) | |
| 785-1099, gnl|tetNig1|chr3 (9176314-9176518) | |
| 785-1099, gnl|xenTro1|scaffold_1587 (3677-3881) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 167-320, gnl|bosTau2|chr19 (47086379-47086532) | |
| 167-320, gnl|canFam2|chr9 (4710676-4710504) | |
| 167-320, gnl|danRer3|chr14 (36330463-36330637) | |
| 167-320, gnl|dasNov1|scaffold_94191 (3072-2899) | |
| 167-320, gnl|fr1|chrUn (224042936-224043112) | |
| 167-320, gnl|galGal2|chr3_random (512154-511988) | |
| 167-320, gnl|hg17|chr17 (75538108-75538280) | |
| 167-320, gnl|Hg17|chr17 (75538110-75538263) | |
| 167-320, gnl|loxAfr1|scaffold_17535 (47763-47935) | |
| 167-320, gnl|mm7|chr11 (119265063-119265234) | |
| 167-320, gnl|Mm7|chr11 (119265064-119265217) | |
| 167-320, gnl|monDom2|scaffold_18 (10559465-10559637) | |
| 167-320, gnl|panTro1|chr19 (79225050-79225222) | |
| 167-320, gnl|rheMac2|chr16 (75396160-75396332) | |
| 167-320, gnl|rn3|chrUn (51982010-51982181) | |
| 167-320, gnl|tetNig1|chr3 (9172369-9172522) | |
| 167-320, gnl|xenTro1|scaffold_125 (43866-43700) | |
| 477-633, gnl|bosTau2|chr19 (47088115-47088271) | |
| 477-633, gnl|canFam2|chr9 (4708995-4708793) | |
| 477-633, gnl|danRer3|chr14 (36336288-36336442) | |
| 477-633, gnl|dasNov1|scaffold_94191 (1616-1441) | |
| 477-633, gnl|echTel1|scaffold_262896 (9885-9706) | |
| 477-633, gnl|fr1|chrUn (224043663-224043833) | |
| 477-633, gnl|galGal2|chr3_random (510093-509908) | |
| 477-633, gnl|hg17|chr17 (75539834-75540011) | |
| 477-633, gnl|Hg17|chr17 (75539839-75539995) | |
| 477-633, gnl|loxAfr1|scaffold_17535 (49481-49658) | |
| 477-633, gnl|mm7|chr11 (119266775-119266953) | |
| 477-633, gnl|Mm7|chr11 (119266780-119266936) | |
| 477-633, gnl|monDom2|scaffold_18 (10561495-10561672) | |
| 477-633, gnl|oryCun1|scaffold_166773 (4414-4588) | |
| 477-633, gnl|panTro1|chr19 (79226860-79227037) | |
| 477-633, gnl|rheMac2|chr16 (75397880-75398057) | |
| 477-633, gnl|rn3|chrUn (51983702-51983879) | |
| 477-633, gnl|tetNig1|chr3 (9173097-9173263) | |
| 477-633, gnl|xenTro1|scaffold_125 (41712-41513) | |
| 785-1099, gnl|bosTau2|chr19 (47139089-47139403) | |
| 785-1099, gnl|canFam2|chr9 (4663155-4662951) | |
| 785-1099, gnl|danRer3|chr14 (36358236-36358436) | |
| 785-1099, gnl|echTel1|scaffold_207808 (7085-6917) | |
| 785-1099, gnl|fr1|chrUn (224047129-224047330) | |
| 785-1099, gnl|galGal2|chr3_random (499461-499236) | |
| 785-1099, gnl|hg17|chr17 (75598549-75598753) | |
| 785-1099, gnl|Hg17|chr17 (75598556-75598870) | |
| 785-1099, gnl|mm7|chr11 (119317811-119318015) | |
| 785-1099, gnl|Mm7|chr11 (119317818-119318132) | |
| 785-1099, gnl|monDom2|scaffold_18 (10643291-10643525) | |
| 785-1099, gnl|oryCun1|scaffold_62063 (1089-1263) | |
| 785-1099, gnl|panTro1|chr19_random (55401815-55401611) | |
| 785-1099, gnl|rheMac2|chr16 (75456838-75457042) | |
| 785-1099, gnl|rn3|chrUn (52033921-52034125) | |
| 785-1099, gnl|tetNig1|chr3 (9176314-9176518) | |
| 785-1099, gnl|xenTro1|scaffold_1587 (3677-3881) |