Non-Coding RNA Search

Ss1.1-Pig2-130E13.5

Sequence:


               
               GACCAGTATTTTGAATATATCCAGTCACTGCCATCCCTAGATAACCCCGAAGTCTTTGGG
CTTCACCCTAATGCTGATATCACGTATCAGAGTAACACTGCTTCTGCTGTTCTTGAAACA
ATTACCAACATTCAACCGAAAGAGAGTGGAGGCGGCGTGGGAGAGACGCGAGAAGCCATA
GTTTACAGGTTATCGGAAGACATGCTGAGCAAGCTGCCTCCCGACTACATTCCACACGAG
GTGAAAGCTCGTTTGATTAAGATGGGGCATCTTAATTCAATGAACATATTTCTTAGACAA
GAAATTGACCGAATGCAGAAAGTCATCTCAATACTTCGAGGTAGCCTGAGTGACCTAAAA
TTGGCCATTGAAGGAACAATCATTATGAGTGAGAACCTGAGAGATGCCCTGGACAATATG
TATGATGCTCGTATACCTCAGATCTGGAAGCGAGTGTCCTGGGATTCGTCCACTCTGGGC
TTCTGGTTTACCGAACTTTTGGAAAGAAATGCTCAGTTTTCCACCTGGATATTTGAAGGG
AGGCCCAATGTGTTCTGGATGACCGGTTTCTTTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCAGTATTTTGAATATATCCAGTCACTGCCATCCCTAGATAACCCCGAAGTCTTTGGG
CTTCACCCTAATGCTGATATCACGTATCAGAGTAACACTGCTTCTGCTGTTCTTGAAACA
ATTACCAACATTCAACCGAAAGAGAGTGGAGGCGGCGTGGGAGAGACGCGAGAAGCCATA
GTTTACAGGTTATCGGAAGACATGCTGAGCAAGCTGCCTCCCGACTACATTCCACACGAG
GTGAAAGCTCGTTTGATTAAGATGGGGCATCTTAATTCAATGAACATATTTCTTAGACAA
GAAATTGACCGAATGCAGAAAGTCATCTCAATACTTCGAGGTAGCCTGAGTGACCTAAAA
TTGGCCATTGAAGGAACAATCATTATGAGTGAGAACCTGAGAGATGCCCTGGACAATATG
TATGATGCTCGTATACCTCAGATCTGGAAGCGAGTGTCCTGGGATTCGTCCACTCTGGGC
TTCTGGTTTACCGAACTTTTGGAAAGAAATGCTCAGTTTTCCACCTGGATATTTGAAGGG
AGGCCCAATGTGTTCTGGATGACCGGTTTCTTTAAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61845518|ref|XP_606053.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61845518|ref|XP_606053.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               80-254, gnl|bosTau2|chr23 (10661402-10661228)
               

               
               80-254, gnl|Hg17|chr6 (39084564-39084740)
               

               
               80-254, gnl|Mm7|chr17 (29043442-29043616)
               


               
               392-576, gnl|bosTau2|chr23 (10656854-10656670)
               

               
               392-576, gnl|Hg17|chr6 (39088200-39088384)
               

               
               392-576, gnl|Mm7|chr17 (29047721-29047905)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               80-254, gnl|bosTau2|chr23 (10661402-10661228)
               

               
               80-254, gnl|Hg17|chr6 (39084564-39084740)
               

               
               80-254, gnl|Mm7|chr17 (29043442-29043616)
               


               
               392-576, gnl|bosTau2|chr23 (10656854-10656670)
               

               
               392-576, gnl|Hg17|chr6 (39088200-39088384)
               

               
               392-576, gnl|Mm7|chr17 (29047721-29047905)

	80-254, gnl\|bosTau2\|chr23 (10661402-10661228)
	80-254, gnl\|Hg17\|chr6 (39084564-39084740)
	80-254, gnl\|Mm7\|chr17 (29043442-29043616)

	392-576, gnl\|bosTau2\|chr23 (10656854-10656670)
	392-576, gnl\|Hg17\|chr6 (39088200-39088384)
	392-576, gnl\|Mm7\|chr17 (29047721-29047905)