Ss1.1-Pig2-131P12.5
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AAAATTATATTAGTATGTATTAGAATTTACACTGTTGAAGTTAGATTTGGAGGAAGGATA
GACTTGGAAGTAAGATGCACAATCGAGAGGTTGTTATGATAGTCCAGGCAGAAGACAGTG
ATACAGAGCTGGGCCATTTCGGGTAGAGGAAGAAGGAAGACAGGTACATGGAAAGGACAC
TTAGATGGCAATCTTTTGTTTGGACAGGCTCCATCAGTTCCTCTAAAGATAAAGCCTGAT
TACTGGAGTGAAAAACTACAGAAAGAAGCAGAAGCTTTTGCTTATTATCGTCGGACACAC
ACTGCCAATGAGCGCCGCCGCCGTGGTGAAATGAGAGATCTCTTTGAGAAATTGAAGATC
ACGTTGGGGTTACTTCATTCTTCCAAGGTTTCCAAAAGTCTCATTCTTACCAGGGTAAGT
GTTCTGTTTTGCCGTTTGTCTGTACAAGAGCCATTCATTTCAATCGGTTTAGGAATCTTT
CCCTCTTGCTAACTTGTCATCTCCCCAAGGGTTCCAAGGACCTTGGGGGCGTGGCTACCG
TCTAGTTGGGGCTCTGGGAAGTGCATTTCTCTGGGGGTGACCAGGCCTGATAATACCATA
AAAGGCTTGATTTTCTCAATTCTGAAGCCGCGTTCTGCAGACCTTCTTCTAGGAACAATA
CCCACGACTGCTTGGTGGTGAATC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AAAATTATATTAGTATGTATTAGAATTTACACTGTTGAAGTTAGATTTGGAGGAAGGATA
GACTTGGAAGTAAGATGCACAATCGAGAGGTTGTTATGATAGTCCAGGCAGAAGACAGTG
ATACAGAGCTGGGCCATTTCGGGTAGAGGAAGAAGGAAGACAGGTACATGGAAAGGACAC
TTAGATGGCAATCTTTTGTTTGGACAGGCTCCATCAGTTCCTCTAAAGATAAAGCCTGAT
TACTGGAGTGAAAAACTACAGAAAGAAGCAGAAGCTTTTGCTTATTATCGTCGGACACAC
ACTGCCAATGAGCGCCGCCGCCGTGGTGAAATGAGAGATCTCTTTGAGAAATTGAAGATC
ACGTTGGGGTTACTTCATTCTTCCAAGGTTTCCAAAAGTCTCATTCTTACCAGGGTAAGT
GTTCTGTTTTGCCGTTTGTCTGTACAAGAGCCATTCATTTCAATCGGTTTAGGAATCTTT
CCCTCTTGCTAACTTGTCATCTCCCCAAGGGTTCCAAGGACCTTGGGGGCGTGGCTACCG
TCTAGTTGGGGCTCTGGGAAGTGCATTTCTCTGGGGGTGACCAGGCCTGATAATACCATA
AAAGGCTTGATTTTCTCAATTCTGAAGCCGCGTTCTGCAGACCTTCTTCTAGGAACAATA
CCCACGACTGCTTGGTGGTGAATC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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4-422, gnl|bosTau2|chr10 (25186436-25186026) |
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4-422, gnl|Hg17|chr15 (39839598-39840032) |
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4-422, gnl|Mm7|chr2 (119698830-119699223) |
| |
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524-684, gnl|bosTau2|chr10 (25174596-25174438) |
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524-684, gnl|canFam2|chr30 (11800011-11800348) |
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524-684, gnl|dasNov1|scaffold_5042 (61362-61052) |
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524-684, gnl|echTel1|scaffold_310315 (46557-46286) |
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524-684, gnl|hg17|chr15 (39853502-39853828) |
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524-684, gnl|Hg17|chr15 (39853654-39853804) |
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524-684, gnl|loxAfr1|scaffold_3669 (46024-45720) |
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524-684, gnl|mm7|chr2 (119712784-119713109) |
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524-684, gnl|Mm7|chr2 (119712965-119713101) |
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524-684, gnl|oryCun1|scaffold_214253 (34562-34243) |
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524-684, gnl|panTro1|chr16 (39828173-39828500) |
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524-684, gnl|rheMac2|chr7 (20192695-20193021) |
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524-684, gnl|rn3|chr3 (106377974-106378270) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-422, gnl|bosTau2|chr10 (25186436-25186026) |
|
4-422, gnl|Hg17|chr15 (39839598-39840032) |
|
4-422, gnl|Mm7|chr2 (119698830-119699223) |
| |
|
524-684, gnl|bosTau2|chr10 (25174596-25174438) |
|
524-684, gnl|canFam2|chr30 (11800011-11800348) |
|
524-684, gnl|dasNov1|scaffold_5042 (61362-61052) |
|
524-684, gnl|echTel1|scaffold_310315 (46557-46286) |
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524-684, gnl|hg17|chr15 (39853502-39853828) |
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524-684, gnl|Hg17|chr15 (39853654-39853804) |
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524-684, gnl|loxAfr1|scaffold_3669 (46024-45720) |
|
524-684, gnl|mm7|chr2 (119712784-119713109) |
|
524-684, gnl|Mm7|chr2 (119712965-119713101) |
|
524-684, gnl|oryCun1|scaffold_214253 (34562-34243) |
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524-684, gnl|panTro1|chr16 (39828173-39828500) |
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524-684, gnl|rheMac2|chr7 (20192695-20193021) |
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524-684, gnl|rn3|chr3 (106377974-106378270) |
