Non-Coding RNA Search

Ss1.1-Pig2-133M10.5

Sequence:


               
               ATAAGACATAAAGACTTGACCTAAATGACTTTAGTGTTTGGAGTGAGACAGATAAGCCAA
CACGACTTCAGTGGAGTGATTGAGACATTCATTGGGGGTATTGGCAGGTACAGAAGAAAG
GTGATTGTCCAGGTTCCTAGGTTTCCCTGAGGCGATGATGCCTATGAAGTGTGCTGATAA
AAACTAAACTAAATTGAACAAAAGAATAAAGGATGAGGGAAAAGCAGATCTTGATAGTCA
GCACTCAGTCTAGGAGTGCGAGGGAGACAGCAGACGTGGTGGTACTAATGAGGAGGCCAT
TTCACTCATCTTTGTTTGTTTGTTTGTTTTCCGTTTCACCAGGCTTGAGGAGAAAAGACA
AAAGTCCAAAATGTGTCAAGGAAGGAAGGGATGAAGAACAGGGGAGGGGCAGGTACACAG
ATTCAGGAGTCACTTGAGAAACAGAATCACTGGAATGACGCACTTATTTAAGGGATAGTG
GAGAGGGAGGGGTANAACACAATGTGAAGGAAAAGGATGAACGCTTGGACAACTCCTGTA
TTTATGACTTGAGTTTCTGTGCATGATGATATCTGAAATCGAGCTAAGGGGTAAGGGAGA
ACAAATAAGCATTGAAAAAGGGAGAGACATGAAAAGGAATCCATTTTAGACATTAAATCG
AGGTGCCTATTGAGGAAGAGAGAAGGTCAAAACTGGAGAAATATATGTATATATTTTTGT
AGGTATATACATATGTGTGTGTATATACACACAATATTACAGGTATGCATATATAGCAAG
GGTTTTATATGTCAATTCTGTCTGACAGAGTCATGTGAAACTACTTTCCTATTAATTTAT
TGCTATCAAATTAACTTATTGCTTGAATGTATCATTTGAAACTCTAATAATTCATTCCAT
ATTTCAAAACATACCATAGAGAAAAATGCTGCAGTCTAAAACTGGTTCCAGACTTATGGA
AACATCATGTGTCTCTACGACCAACACCAAGAGGAAAACTGTGCCAATGACATGCCTAAA
CCTGTTTTGGTTTCAATTACCTGGATTATTGAGGCAGAAACAAGCTTTGTGCCTAATTGA
CCCTTTTAATTACCTTCCTTCTCTGCTTTGCCTCACCTGTGGGTGTATTTCCATGTTGTA
CTATTATTAGAAAGGAAAAGTCACTTGCTTTTTTAGGTGGATCCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAGACATAAAGACTTGACCTAAATGACTTTAGTGTTTGGAGTGAGACAGATAAGCCAA
CACGACTTCAGTGGAGTGATTGAGACATTCATTGGGGGTATTGGCAGGTACAGAAGAAAG
GTGATTGTCCAGGTTCCTAGGTTTCCCTGAGGCGATGATGCCTATGAAGTGTGCTGATAA
AAACTAAACTAAATTGAACAAAAGAATAAAGGATGAGGGAAAAGCAGATCTTGATAGTCA
GCACTCAGTCTAGGAGTGCGAGGGAGACAGCAGACGTGGTGGTACTAATGAGGAGGCCAT
TTCACTCATCTTTGTTTGTTTGTTTGTTTTCCGTTTCACCAGGCTTGAGGAGAAAAGACA
AAAGTCCAAAATGTGTCAAGGAAGGAAGGGATGAAGAACAGGGGAGGGGCAGGTACACAG
ATTCAGGAGTCACTTGAGAAACAGAATCACTGGAATGACGCACTTATTTAAGGGATAGTG
GAGAGGGAGGGGTANAACACAATGTGAAGGAAAAGGATGAACGCTTGGACAACTCCTGTA
TTTATGACTTGAGTTTCTGTGCATGATGATATCTGAAATCGAGCTAAGGGGTAAGGGAGA
ACAAATAAGCATTGAAAAAGGGAGAGACATGAAAAGGAATCCATTTTAGACATTAAATCG
AGGTGCCTATTGAGGAAGAGAGAAGGTCAAAACTGGAGAAATATATGTATATATTTTTGT
AGGTATATACATATGTGTGTGTATATACACACAATATTACAGGTATGCATATATAGCAAG
GGTTTTATATGTCAATTCTGTCTGACAGAGTCATGTGAAACTACTTTCCTATTAATTTAT
TGCTATCAAATTAACTTATTGCTTGAATGTATCATTTGAAACTCTAATAATTCATTCCAT
ATTTCAAAACATACCATAGAGAAAAATGCTGCAGTCTAAAACTGGTTCCAGACTTATGGA
AACATCATGTGTCTCTACGACCAACACCAAGAGGAAAACTGTGCCAATGACATGCCTAAA
CCTGTTTTGGTTTCAATTACCTGGATTATTGAGGCAGAAACAAGCTTTGTGCCTAATTGA
CCCTTTTAATTACCTTCCTTCTCTGCTTTGCCTCACCTGTGGGTGTATTTCCATGTTGTA
CTATTATTAGAAAGGAAAAGTCACTTGCTTTTTTAGGTGGATCCCTGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-256, gnl|bosTau2|chr1 (11841614-11841864)
               


               
               336-714, gnl|bosTau2|chr1 (11842477-11842859)
               


               
               753-1174, gnl|bosTau2|chr1 (11843873-11844291)
               

               
               753-1174, gnl|Hg17|chr21 (16788383-16788813)
               

               
               753-1174, gnl|Mm7|chr16 (77557880-77558307)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-256, gnl|bosTau2|chr1 (11841614-11841864)
               


               
               336-714, gnl|bosTau2|chr1 (11842477-11842859)
               


               
               753-1174, gnl|bosTau2|chr1 (11843873-11844291)
               

               
               753-1174, gnl|Hg17|chr21 (16788383-16788813)
               

               
               753-1174, gnl|Mm7|chr16 (77557880-77558307)

	1-256, gnl\|bosTau2\|chr1 (11841614-11841864)

	336-714, gnl\|bosTau2\|chr1 (11842477-11842859)

	753-1174, gnl\|bosTau2\|chr1 (11843873-11844291)
	753-1174, gnl\|Hg17\|chr21 (16788383-16788813)
	753-1174, gnl\|Mm7\|chr16 (77557880-77558307)