Non-Coding RNA Search

Ss1.1-Pig2-133N18.5

Sequence:


               
               CCGGGCTGCAACCTGGCGGCTGTTCCCCTGGAGGGGCTACTGCTCCAGGGGGACACAGGG
CGAACTCAGCAAAGGCTTTGTGGAGGCTCTGAAGGCAGTCGTGGGAAGCCCGCACGTGTC
TACCGCCGCTGCGGTCCGAGAGCAGCACGGGCGCGATGAGTCCTTTCACAGGTGCCAACC
TCCTGACGCTGTGGTGTGGCCCCAGAATGTGGAGCAGGTCAGCCAGCTGGCAGCCCTGTG
CTATGACCAAGGCGTGCCCATCATCCCGTTTGGCACAGGCACCGGGCTTGAGGGTGGAGT
CTGTGCGGTGCAGGGCGGTGTCTGCGTCAACCTGACCCACATGGACCGAATCCTGCAGCT
GAATCTAGAAGACTTTTCCGTGTTGGTGGAACCCGGCGTCACCCGCAAAGCTCTCAACAC
CCACCTGCGGGACAGTGGTCTCTGGTTCCCCGTGGATCCGGGTGCAGACGCCTCTCTTTG
CGGCATGGTGGCCACCGGGGCCTCGGGCACCAACGCTGTGCGCTATGGCACCATGCGCGA
CAACGTGCTGAACTTGGAGGTGGTGCTGCCTGGTGGGCGGCTGCTCCACACCGCGGGGCC
CGGCCGGCACTTCCGGAAGAGCGCAGCGGGCTACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGGCTGCAACCTGGCGGCTGTTCCCCTGGAGGGGCTACTGCTCCAGGGGGACACAGGG
CGAACTCAGCAAAGGCTTTGTGGAGGCTCTGAAGGCAGTCGTGGGAAGCCCGCACGTGTC
TACCGCCGCTGCGGTCCGAGAGCAGCACGGGCGCGATGAGTCCTTTCACAGGTGCCAACC
TCCTGACGCTGTGGTGTGGCCCCAGAATGTGGAGCAGGTCAGCCAGCTGGCAGCCCTGTG
CTATGACCAAGGCGTGCCCATCATCCCGTTTGGCACAGGCACCGGGCTTGAGGGTGGAGT
CTGTGCGGTGCAGGGCGGTGTCTGCGTCAACCTGACCCACATGGACCGAATCCTGCAGCT
GAATCTAGAAGACTTTTCCGTGTTGGTGGAACCCGGCGTCACCCGCAAAGCTCTCAACAC
CCACCTGCGGGACAGTGGTCTCTGGTTCCCCGTGGATCCGGGTGCAGACGCCTCTCTTTG
CGGCATGGTGGCCACCGGGGCCTCGGGCACCAACGCTGTGCGCTATGGCACCATGCGCGA
CAACGTGCTGAACTTGGAGGTGGTGCTGCCTGGTGGGCGGCTGCTCCACACCGCGGGGCC
CGGCCGGCACTTCCGGAAGAGCGCAGCGGGCTACAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61859200|ref|XP_586898.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61859200|ref|XP_586898.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               169-314, gnl|bosTau2|chr18 (1375072-1374927)
               

               
               169-314, gnl|Hg17|chr16 (73706741-73706596)
               

               
               169-314, gnl|Mm7|chr8 (110229799-110229650)
               


               
               419-624, gnl|bosTau2|chr18 (1374511-1374306)
               

               
               419-624, gnl|Hg17|chr16 (73706154-73705917)
               

               
               419-624, gnl|Mm7|chr8 (110229255-110229023)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-314, gnl|bosTau2|chr18 (1375072-1374927)
               

               
               169-314, gnl|Hg17|chr16 (73706741-73706596)
               

               
               169-314, gnl|Mm7|chr8 (110229799-110229650)
               


               
               419-624, gnl|bosTau2|chr18 (1374511-1374306)
               

               
               419-624, gnl|Hg17|chr16 (73706154-73705917)
               

               
               419-624, gnl|Mm7|chr8 (110229255-110229023)

	169-314, gnl\|bosTau2\|chr18 (1375072-1374927)
	169-314, gnl\|Hg17\|chr16 (73706741-73706596)
	169-314, gnl\|Mm7\|chr8 (110229799-110229650)

	419-624, gnl\|bosTau2\|chr18 (1374511-1374306)
	419-624, gnl\|Hg17\|chr16 (73706154-73705917)
	419-624, gnl\|Mm7\|chr8 (110229255-110229023)