Ss1.1-Pig2-141K18.5
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TCTTCCCTGCGTGGACGCCCACGTTTTCTCTCATTTCTTTCCCTGTTTCAACTACTGATC
TACCCTTCTCCGTTTATACTCCCTACCCTGTGATCCCTGTGACCTTCCCTGGTCCTATGC
TCTCGTGTAAAGCCCCTTATATCTCTTGTGTCAGTGTCGATTTTCGTAAGTTTGACTTCT
TTCTCTCAGAGTCTCTGCCTGTTGATCCTGCTGATTTTGGGGACCTCTTTCTTCACCTGC
CTCCTTCCGTCATAGTCTGTCCCCCTACCCCTTGGATTCCTAAGACAATTCTGTGGTTTT
TCTGTCCTTTTAGTTTCGCTCCCTCTCCTATTTGTCCCCTTTTCTCTGTGCGCCCCACCC
TGTCTCCTTTTGTCCCTTTCAGCCTCTGAGATTATCTCCCCTCTCCCCTGAGAACCTGGT
CTTTGTGCTCTACCCACTCCTCATTTTTTTGCCACTCTCGTTTGTGATTGTGTGCTTCCC
TGCCAGGTTCCATTCCAATAGTTTGCTCCTCCTTCTCTCTGTGGTTTCTCTTTTGTGAGG
GTAGCATCTTCTCTAACCACTCACTCCATCCCTCTTTTCTTGAGGATTTCTTTTCACTCC
CTTCTGATTGTGTCTCTGCTTGTGCTCAGATTGCTGGGTCCTGTAGTTTTGTGTTACGAG
TTGGTGTGTGCAATCTTTTCTGCTTGATCCAACTCCTTTGTTTGATCCTTTGCCAGCCTT
CTTTTCTCCTTCCTGTGTCCGGTCTTTTCTGCTGGTCTCTGTCTCCTACAGGATCTGGGT
TACAGATCCTGTGTGTCAGGTAGTCTGGACACAAAAGGGTGGCAGAAGTGACTTCTTGCT
GGACTGCTGTGCAAGGGAGAGAGAAACAGTGACCCAGAGGCGGGGACTGACAAGAACCAA
GCTTAAGACCTAGAACGAAATTGGTTCCAGCATCTAGGACCCAGACACAGGACCATGGGA
CCCCGGCATTTGTGCCCTGTGCAGCTGCTCTGTCTCCTGGGGGCCATCTCCACTCTGCCT
CGGACCAGAAGGGGAGTGGTGGGTTTTAAAGGCTGCAGCCCAGCTGCATCTTACCCTCCG
CAAGTTTCCTACCTCATTTCACCACCAGGATTGTCCATTGCCTCCTATAGCCGTATCTGC
CGGACGTATCTCTGCAATAACCTCACTGACATGGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCTTCCCTGCGTGGACGCCCACGTTTTCTCTCATTTCTTTCCCTGTTTCAACTACTGATC
TACCCTTCTCCGTTTATACTCCCTACCCTGTGATCCCTGTGACCTTCCCTGGTCCTATGC
TCTCGTGTAAAGCCCCTTATATCTCTTGTGTCAGTGTCGATTTTCGTAAGTTTGACTTCT
TTCTCTCAGAGTCTCTGCCTGTTGATCCTGCTGATTTTGGGGACCTCTTTCTTCACCTGC
CTCCTTCCGTCATAGTCTGTCCCCCTACCCCTTGGATTCCTAAGACAATTCTGTGGTTTT
TCTGTCCTTTTAGTTTCGCTCCCTCTCCTATTTGTCCCCTTTTCTCTGTGCGCCCCACCC
TGTCTCCTTTTGTCCCTTTCAGCCTCTGAGATTATCTCCCCTCTCCCCTGAGAACCTGGT
CTTTGTGCTCTACCCACTCCTCATTTTTTTGCCACTCTCGTTTGTGATTGTGTGCTTCCC
TGCCAGGTTCCATTCCAATAGTTTGCTCCTCCTTCTCTCTGTGGTTTCTCTTTTGTGAGG
GTAGCATCTTCTCTAACCACTCACTCCATCCCTCTTTTCTTGAGGATTTCTTTTCACTCC
CTTCTGATTGTGTCTCTGCTTGTGCTCAGATTGCTGGGTCCTGTAGTTTTGTGTTACGAG
TTGGTGTGTGCAATCTTTTCTGCTTGATCCAACTCCTTTGTTTGATCCTTTGCCAGCCTT
CTTTTCTCCTTCCTGTGTCCGGTCTTTTCTGCTGGTCTCTGTCTCCTACAGGATCTGGGT
TACAGATCCTGTGTGTCAGGTAGTCTGGACACAAAAGGGTGGCAGAAGTGACTTCTTGCT
GGACTGCTGTGCAAGGGAGAGAGAAACAGTGACCCAGAGGCGGGGACTGACAAGAACCAA
GCTTAAGACCTAGAACGAAATTGGTTCCAGCATCTAGGACCCAGACACAGGACCATGGGA
CCCCGGCATTTGTGCCCTGTGCAGCTGCTCTGTCTCCTGGGGGCCATCTCCACTCTGCCT
CGGACCAGAAGGGGAGTGGTGGGTTTTAAAGGCTGCAGCCCAGCTGCATCTTACCCTCCG
CAAGTTTCCTACCTCATTTCACCACCAGGATTGTCCATTGCCTCCTATAGCCGTATCTGC
CGGACGTATCTCTGCAATAACCTCACTGACATGGAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
332-859, gnl|bosTau2|chr18 (46811820-46811289) |
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332-859, gnl|Hg17|chr19 (47040055-47039508) |
| |
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1013-1176, gnl|bosTau2|chr18 (46731196-46731034) |
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1013-1176, gnl|canFam2|chr1 (115353968-115353642) |
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1013-1176, gnl|echTel1|scaffold_313986 (42198-41868) |
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1013-1176, gnl|hg17|chr19 (47033892-47034223) |
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1013-1176, gnl|Hg17|chr19 (47034183-47034021) |
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1013-1176, gnl|mm7|chr7 (21654814-21655143) |
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1013-1176, gnl|Mm7|chr7 (21655105-21654943) |
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1013-1176, gnl|oryCun1|scaffold_194633 (499-823) |
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1013-1176, gnl|rheMac2|chr19 (48150918-48151249) |
|
1013-1176, gnl|rn3|chr1 (80234627-80234957) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
332-859, gnl|bosTau2|chr18 (46811820-46811289) |
|
332-859, gnl|Hg17|chr19 (47040055-47039508) |
| |
|
1013-1176, gnl|bosTau2|chr18 (46731196-46731034) |
|
1013-1176, gnl|canFam2|chr1 (115353968-115353642) |
|
1013-1176, gnl|echTel1|scaffold_313986 (42198-41868) |
|
1013-1176, gnl|hg17|chr19 (47033892-47034223) |
|
1013-1176, gnl|Hg17|chr19 (47034183-47034021) |
|
1013-1176, gnl|mm7|chr7 (21654814-21655143) |
|
1013-1176, gnl|Mm7|chr7 (21655105-21654943) |
|
1013-1176, gnl|oryCun1|scaffold_194633 (499-823) |
|
1013-1176, gnl|rheMac2|chr19 (48150918-48151249) |
|
1013-1176, gnl|rn3|chr1 (80234627-80234957) |
