Non-Coding RNA Search

Ss1.1-Pig2-142O02.5

Sequence:


               
               ATTTTAATGAAGAAAATATTCCCATCTTTGGGAAGTGAGAGTTGAAATCTTCTCAGAGTA
TTTATTTTATACTTGATACTTCTTGTCATTTTCTTGAACCTACTTGTAAGGAGTGAATTT
GGCATCACAGACCAAACCAACATGAGGAAGCTGAGTGTGTGGAGGGTGGGATTGGGACTC
TGACAAGTGTGGACTCCAATTTGACACCATTGCGTAGTCATTCTGTGATCTTAGATGAAA
TACTTAGCTTGTTTGAGTCTCTTTTTCCTGTTCTGTAAAATGGGGTTAAATGACACCTAC
CTCATAAGATTATATTCAGGTTTCAATGAGATAATGAAAGAGCTTAGCCTCAGTGTCAGG
CACATGGTCATTTTCTCATTAAAAACCAATTGCCTTCCTTTCTCACACTCCCCAGGGCAA
AATATGGGCAAGTAAATGCAGTATAGCATTTATTTATTGTTCATCTGGCAGAAGCTGTTG
CTGACCTATAGTAAGTGACAGGTTTGGGTGTTTAGCAGTTAGAGATTTTGGAATCTGCAG
GAAAGTAGCAGAGGGCTCTTTTGACATCCTATGAGCTTAGTGTTTCAAACTTGGGTGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTAATGAAGAAAATATTCCCATCTTTGGGAAGTGAGAGTTGAAATCTTCTCAGAGTA
TTTATTTTATACTTGATACTTCTTGTCATTTTCTTGAACCTACTTGTAAGGAGTGAATTT
GGCATCACAGACCAAACCAACATGAGGAAGCTGAGTGTGTGGAGGGTGGGATTGGGACTC
TGACAAGTGTGGACTCCAATTTGACACCATTGCGTAGTCATTCTGTGATCTTAGATGAAA
TACTTAGCTTGTTTGAGTCTCTTTTTCCTGTTCTGTAAAATGGGGTTAAATGACACCTAC
CTCATAAGATTATATTCAGGTTTCAATGAGATAATGAAAGAGCTTAGCCTCAGTGTCAGG
CACATGGTCATTTTCTCATTAAAAACCAATTGCCTTCCTTTCTCACACTCCCCAGGGCAA
AATATGGGCAAGTAAATGCAGTATAGCATTTATTTATTGTTCATCTGGCAGAAGCTGTTG
CTGACCTATAGTAAGTGACAGGTTTGGGTGTTTAGCAGTTAGAGATTTTGGAATCTGCAG
GAAAGTAGCAGAGGGCTCTTTTGACATCCTATGAGCTTAGTGTTTCAAACTTGGGTGTGC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               1-600, gnl|bosTau2|chr24 (32160487-32161063)
               

               
               1-600, gnl|canFam2|chr7 (47503158-47502561)
               

               
               1-600, gnl|dasNov1|scaffold_47103 (577-11)
               

               
               1-600, gnl|hg17|chr18 (42661133-42661728)
               

               
               1-600, gnl|Hg17|chr18 (42661752-42661145)
               

               
               1-600, gnl|mm7|chr18 (77418521-77417968)
               

               
               1-600, gnl|Mm7|chr18 (77417944-77418507)
               

               
               1-600, gnl|panTro1|chr17 (39001206-39001801)
               

               
               1-600, gnl|rheMac2|chr18 (39908755-39909350)
               

               
               1-600, gnl|rn3|chr18 (74186908-74186365)

Aligned organism(s): 10 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr24 (32160487-32161063)
               

               
               1-600, gnl|canFam2|chr7 (47503158-47502561)
               

               
               1-600, gnl|dasNov1|scaffold_47103 (577-11)
               

               
               1-600, gnl|hg17|chr18 (42661133-42661728)
               

               
               1-600, gnl|Hg17|chr18 (42661752-42661145)
               

               
               1-600, gnl|mm7|chr18 (77418521-77417968)
               

               
               1-600, gnl|Mm7|chr18 (77417944-77418507)
               

               
               1-600, gnl|panTro1|chr17 (39001206-39001801)
               

               
               1-600, gnl|rheMac2|chr18 (39908755-39909350)
               

               
               1-600, gnl|rn3|chr18 (74186908-74186365)

	1-600, gnl\|bosTau2\|chr24 (32160487-32161063)
	1-600, gnl\|canFam2\|chr7 (47503158-47502561)
	1-600, gnl\|dasNov1\|scaffold_47103 (577-11)
	1-600, gnl\|hg17\|chr18 (42661133-42661728)
	1-600, gnl\|Hg17\|chr18 (42661752-42661145)
	1-600, gnl\|mm7\|chr18 (77418521-77417968)
	1-600, gnl\|Mm7\|chr18 (77417944-77418507)
	1-600, gnl\|panTro1\|chr17 (39001206-39001801)
	1-600, gnl\|rheMac2\|chr18 (39908755-39909350)
	1-600, gnl\|rn3\|chr18 (74186908-74186365)