Ss1.1-Pig2-19H13.5
|
GCGGACGCGTGGGCGGACGCGTGGGTTTATATGCACACTTTTACTACCTCGAACTCCTCC
ATCAGCCGGTGTGAGAGTGGGTGCACCGCAAAACCTTTATGTGTAAGAACGGTGGCTTAG
AAAGTTGCAGCTTTTCCTCCAAGCAGTTGTGTACTCTGCATCTCAGAGGCAGCATCCACA
ACGAGGCTGAAGCACCCCGTGTACAGTATTCCTCCATGTTTTCTCAGCATTTGCTGTTCT
TTTGCAGAAGCTACTCCTCAACTCCCCGTCCTTGGCATTTTCTGCCTGAAGCTCAGCGGA
ATTTTTCTTGTAATTTGCAGCGGGATGCTTTCAGCAGCAGCCCCTTGAGATTTGTATAAG
CTGTTGGAGAATGAGAGGGCAAGAACTGTAAACACTCATTAATTCCAGTGGTTTCCCCAG
GGCCACGCTATGGCTGTCTGTATTTAATGAGCATTCCCTTTCAAAGGAATTCAGATTTAA
TATCAGTATGATTTCATTTGGTGTTTCAAATAGCAAAGAAAACAGACTGCTTTGATCAAC
CCCAAGTGCTGAAGCAGCCTCTCCTTCTTTGTTGAAAAATCAAAATAAGAATTCTCTCAT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGACGCGTGGGCGGACGCGTGGGTTTATATGCACACTTTTACTACCTCGAACTCCTCC
ATCAGCCGGTGTGAGAGTGGGTGCACCGCAAAACCTTTATGTGTAAGAACGGTGGCTTAG
AAAGTTGCAGCTTTTCCTCCAAGCAGTTGTGTACTCTGCATCTCAGAGGCAGCATCCACA
ACGAGGCTGAAGCACCCCGTGTACAGTATTCCTCCATGTTTTCTCAGCATTTGCTGTTCT
TTTGCAGAAGCTACTCCTCAACTCCCCGTCCTTGGCATTTTCTGCCTGAAGCTCAGCGGA
ATTTTTCTTGTAATTTGCAGCGGGATGCTTTCAGCAGCAGCCCCTTGAGATTTGTATAAG
CTGTTGGAGAATGAGAGGGCAAGAACTGTAAACACTCATTAATTCCAGTGGTTTCCCCAG
GGCCACGCTATGGCTGTCTGTATTTAATGAGCATTCCCTTTCAAAGGAATTCAGATTTAA
TATCAGTATGATTTCATTTGGTGTTTCAAATAGCAAAGAAAACAGACTGCTTTGATCAAC
CCCAAGTGCTGAAGCAGCCTCTCCTTCTTTGTTGAAAAATCAAAATAAGAATTCTCTCAT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
28-585, gnl|bosTau2|chr25 (18771970-18771423) |
|
28-585, gnl|canFam2|chr6 (26399546-26398953) |
|
28-585, gnl|dasNov1|scaffold_8039 (44804-44209) |
|
28-585, gnl|echTel1|scaffold_278787 (70730-70199) |
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28-585, gnl|hg17|chr16 (22203663-22204266) |
|
28-585, gnl|Hg17|chr16 (22203866-22204560) |
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28-585, gnl|loxAfr1|scaffold_81056 (8079-8667) |
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28-585, gnl|mm7|chr7 (116826107-116826700) |
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28-585, gnl|Mm7|chr7 (116826296-116826836) |
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28-585, gnl|monDom2|scaffold_19 (42729266-42729824) |
|
28-585, gnl|oryCun1|scaffold_121887 (15027-15423) |
|
28-585, gnl|panTro1|chr18_random (10366075-10366678) |
|
28-585, gnl|rheMac2|chr20 (20701804-20702430) |
|
28-585, gnl|rn3|chr1 (179894006-179894578) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
28-585, gnl|bosTau2|chr25 (18771970-18771423) |
|
28-585, gnl|canFam2|chr6 (26399546-26398953) |
|
28-585, gnl|dasNov1|scaffold_8039 (44804-44209) |
|
28-585, gnl|echTel1|scaffold_278787 (70730-70199) |
|
28-585, gnl|hg17|chr16 (22203663-22204266) |
|
28-585, gnl|Hg17|chr16 (22203866-22204560) |
|
28-585, gnl|loxAfr1|scaffold_81056 (8079-8667) |
|
28-585, gnl|mm7|chr7 (116826107-116826700) |
|
28-585, gnl|Mm7|chr7 (116826296-116826836) |
|
28-585, gnl|monDom2|scaffold_19 (42729266-42729824) |
|
28-585, gnl|oryCun1|scaffold_121887 (15027-15423) |
|
28-585, gnl|panTro1|chr18_random (10366075-10366678) |
|
28-585, gnl|rheMac2|chr20 (20701804-20702430) |
|
28-585, gnl|rn3|chr1 (179894006-179894578) |
