Ss1.1-Pig2-25M23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCCGCTGGTCAACCGGCTGCAGGATGCCTTTCTGCCATCGGCCAGAATGCGGACCTCGA CCTGCCGCAGATCGCAGTGGTGGGCGGCCAGAGCGCCGGGAAGAGCTCGGTGCTCGAGAA TTTCGTAGGCAGGGACTTCCTGCCACGAGGATCTGGCATTGTCACCCGACGTCCCCTGGT TCTGCAGCTGGTCAATGCTACCACAGAATATGCCGAGTTCCTGCACTGCAAGGGGAAGAA ATTCACCGACTTCGAAGAGGTTCGCCTGGAAATTGAGGCCGAGACAGACCGGGTCACCGG CACCAACAAGGGAATCTCTCCAGTGCCCATCAACCTCCGCGTCTACTCGCCGCACGTGCT GAACCTGACCCTAGTGGACCTGCCCGGAATGACCAAGGTCCCGGTGGGGGACCAGCCTCC TGACATCGAGTTCCAGATCCGAGACATGCTGATGCAGTTCGTCACCAAGGAGAACTGCCT CATCTTGGCTGTGTCCCCTGCCAACTCCGACCTGGCCAACTCCGATGCCCTCAAGGTCGC CAAGGAGGTGGACCCCCAGGGTCAGCGCACTATTGGGGTGATCACCAAGTTGGACCTGAT GGACGAAGGAACAGATGCTCGCGATGTTCTGGAGAACAAGCTGCTCCCGCTGCGCAGGGG CTACATTGGCGTGGTAAACCGAAGCCAGAAGGACATCGATGGTAAGAAAGATATCACGGC TGCCTTGGCTGCTGAACGCAAGTTCTTCCTCTCCCACCCTTCCTATCGCCACTTGGCTGA CCGCATGGGCACGCCCTACCTACAGAAGGTCCTCAACCAGCAACTGACAAACCACATCCG GGACACACTGCCCGGGCTGCGGAACAAGCTGCAGAGCCAGCTGCTGTCCATTGAGAAGGA GGTGGAGGAGTACAAGAACTTCCGCCCCGATGACCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCCGCTGGTCAACCGGCTGCAGGATGCCTTTCTGCCATCGGCCAGAATGCGGACCTCGA CCTGCCGCAGATCGCAGTGGTGGGCGGCCAGAGCGCCGGGAAGAGCTCGGTGCTCGAGAA TTTCGTAGGCAGGGACTTCCTGCCACGAGGATCTGGCATTGTCACCCGACGTCCCCTGGT TCTGCAGCTGGTCAATGCTACCACAGAATATGCCGAGTTCCTGCACTGCAAGGGGAAGAA ATTCACCGACTTCGAAGAGGTTCGCCTGGAAATTGAGGCCGAGACAGACCGGGTCACCGG CACCAACAAGGGAATCTCTCCAGTGCCCATCAACCTCCGCGTCTACTCGCCGCACGTGCT GAACCTGACCCTAGTGGACCTGCCCGGAATGACCAAGGTCCCGGTGGGGGACCAGCCTCC TGACATCGAGTTCCAGATCCGAGACATGCTGATGCAGTTCGTCACCAAGGAGAACTGCCT CATCTTGGCTGTGTCCCCTGCCAACTCCGACCTGGCCAACTCCGATGCCCTCAAGGTCGC CAAGGAGGTGGACCCCCAGGGTCAGCGCACTATTGGGGTGATCACCAAGTTGGACCTGAT GGACGAAGGAACAGATGCTCGCGATGTTCTGGAGAACAAGCTGCTCCCGCTGCGCAGGGG CTACATTGGCGTGGTAAACCGAAGCCAGAAGGACATCGATGGTAAGAAAGATATCACGGC TGCCTTGGCTGCTGAACGCAAGTTCTTCCTCTCCCACCCTTCCTATCGCCACTTGGCTGA CCGCATGGGCACGCCCTACCTACAGAAGGTCCTCAACCAGCAACTGACAAACCACATCCG GGACACACTGCCCGGGCTGCGGAACAAGCTGCAGAGCCAGCTGCTGTCCATTGAGAAGGA GGTGGAGGAGTACAAGAACTTCCGCCCCGATGACCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 395-514, - strand, RNAz p=0.985283 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 395-514, - strand, RNAz p=0.985283 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-133, gnl|bosTau2|chr11 (78105756-78105889) | |
| 1-133, gnl|Hg17|chr9 (128045332-128045465) | |
| 1-133, gnl|Mm7|chr2 (32360492-32360359) | |
| 356-562, gnl|bosTau2|chr11 (78120665-78120871) | |
| 356-562, gnl|canFam2|chr9 (58627697-58627503) | |
| 356-562, gnl|danRer3|chr23 (37777611-37777820) | |
| 356-562, gnl|dasNov1|scaffold_27923 (2562-2781) | |
| 356-562, gnl|echTel1|scaffold_297331 (34389-34608) | |
| 356-562, gnl|fr1|chrUn (160308320-160308534) | |
| 356-562, gnl|galGal2|chr17 (5689995-5690214) | |
| 356-562, gnl|hg17|chr9 (128060876-128061095) | |
| 356-562, gnl|Hg17|chr9 (128060881-128061087) | |
| 356-562, gnl|loxAfr1|scaffold_107900 (462-681) | |
| 356-562, gnl|mm7|chr2 (32347443-32347224) | |
| 356-562, gnl|Mm7|chr2 (32347436-32347230) | |
| 356-562, gnl|monDom2|scaffold_51 (2734625-2734844) | |
| 356-562, gnl|oryCun1|scaffold_199290 (4429-4210) | |
| 356-562, gnl|panTro1|chr11 (112894932-112895151) | |
| 356-562, gnl|rheMac2|chr15 (10661591-10661372) | |
| 356-562, gnl|rn3|chr3 (11362685-11362466) | |
| 356-562, gnl|tetNig1|chr4 (2682230-2682443) | |
| 356-562, gnl|xenTro1|scaffold_82 (380277-380060) | |
| 659-820, gnl|bosTau2|chr11 (78121364-78121525) | |
| 659-820, gnl|Hg17|chr9 (128062013-128062174) | |
| 659-820, gnl|Mm7|chr2 (32345206-32345045) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-133, gnl|bosTau2|chr11 (78105756-78105889) | |
| 1-133, gnl|Hg17|chr9 (128045332-128045465) | |
| 1-133, gnl|Mm7|chr2 (32360492-32360359) | |
| 356-562, gnl|bosTau2|chr11 (78120665-78120871) | |
| 356-562, gnl|canFam2|chr9 (58627697-58627503) | |
| 356-562, gnl|danRer3|chr23 (37777611-37777820) | |
| 356-562, gnl|dasNov1|scaffold_27923 (2562-2781) | |
| 356-562, gnl|echTel1|scaffold_297331 (34389-34608) | |
| 356-562, gnl|fr1|chrUn (160308320-160308534) | |
| 356-562, gnl|galGal2|chr17 (5689995-5690214) | |
| 356-562, gnl|hg17|chr9 (128060876-128061095) | |
| 356-562, gnl|Hg17|chr9 (128060881-128061087) | |
| 356-562, gnl|loxAfr1|scaffold_107900 (462-681) | |
| 356-562, gnl|mm7|chr2 (32347443-32347224) | |
| 356-562, gnl|Mm7|chr2 (32347436-32347230) | |
| 356-562, gnl|monDom2|scaffold_51 (2734625-2734844) | |
| 356-562, gnl|oryCun1|scaffold_199290 (4429-4210) | |
| 356-562, gnl|panTro1|chr11 (112894932-112895151) | |
| 356-562, gnl|rheMac2|chr15 (10661591-10661372) | |
| 356-562, gnl|rn3|chr3 (11362685-11362466) | |
| 356-562, gnl|tetNig1|chr4 (2682230-2682443) | |
| 356-562, gnl|xenTro1|scaffold_82 (380277-380060) | |
| 659-820, gnl|bosTau2|chr11 (78121364-78121525) | |
| 659-820, gnl|Hg17|chr9 (128062013-128062174) | |
| 659-820, gnl|Mm7|chr2 (32345206-32345045) |