Ss1.1-Pig2-27I06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAATATTTGTGGCCGGGACTCTTTACAGGGGATGAAGGATTGGCAGGACATCGTAGGC TGGTTTGAGAAGGACAACACCTACCTAGTGGAACTCTCCAGCCTCCTGGTTCGGAACGTC AACTACGAGATCCCCTCACTGAAGAAACAGATCGCCAAGTGCCAGCAGCTGCAGCAAGAA TACAGCCGCAAGGAAGAGGAGGGCCAGGCGGGGGCCGCCGAGATGCGGGAGCAGTTCTAC CACTCGTGCAAGCAGTATGGCATCACGGGGGACAACGTCCGAAGAGAACTGCTGGCCCTG GTGAAGGACCTGCCGAGCCAGCTGGCCGAGATTGGGGCGGCAGCCCAGTCCCTGGGGGAA GCCATCGACCTGTACCAGGCCTGCGTGGGGTTTGTGTGTGAAAGCCCCGAGGAGCAGGTG CTGCCCATGCTGCGGTTTGTGCAAACACGGGGGAACGGCACCGTGTACGAGTGGAGGACG GGCACCGAGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAATATTTGTGGCCGGGACTCTTTACAGGGGATGAAGGATTGGCAGGACATCGTAGGC TGGTTTGAGAAGGACAACACCTACCTAGTGGAACTCTCCAGCCTCCTGGTTCGGAACGTC AACTACGAGATCCCCTCACTGAAGAAACAGATCGCCAAGTGCCAGCAGCTGCAGCAAGAA TACAGCCGCAAGGAAGAGGAGGGCCAGGCGGGGGCCGCCGAGATGCGGGAGCAGTTCTAC CACTCGTGCAAGCAGTATGGCATCACGGGGGACAACGTCCGAAGAGAACTGCTGGCCCTG GTGAAGGACCTGCCGAGCCAGCTGGCCGAGATTGGGGCGGCAGCCCAGTCCCTGGGGGAA GCCATCGACCTGTACCAGGCCTGCGTGGGGTTTGTGTGTGAAAGCCCCGAGGAGCAGGTG CTGCCCATGCTGCGGTTTGTGCAAACACGGGGGAACGGCACCGTGTACGAGTGGAGGACG GGCACCGAGCCC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 87-268, - strand, RNAz p=0.70799 | |
| 150-268, + strand, RNAz p=0.642567 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 87-268, - strand, RNAz p=0.70799 | |
| 150-268, + strand, RNAz p=0.642567 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of CR608342, + |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 87-268, gnl|bosTau2|chr19 (31163493-31163312) | |
| 87-268, gnl|canFam2|chr9 (27608829-27609039) | |
| 87-268, gnl|canFam2|chr9 (27609032-27608854) | |
| 87-268, gnl|danRer3|chr12 (23500308-23500104) | |
| 87-268, gnl|danRer3|chr12 (23500126-23500303) | |
| 87-268, gnl|fr1|chrUn (226866695-226866896) | |
| 87-268, gnl|fr1|chrUn (226866878-226866701) | |
| 87-268, gnl|hg17|chr17 (43407499-43407723) | |
| 87-268, gnl|Hg17|chr17 (43407522-43407703) | |
| 87-268, gnl|hg17|chr20 (29337789-29337967) | |
| 87-268, gnl|mm7|chr11 (97021461-97021241) | |
| 87-268, gnl|mm7|chr11 (97021258-97021436) | |
| 87-268, gnl|Mm7|chr11 (97021436-97021255) | |
| 87-268, gnl|monDom2|scaffold_18 (46500381-46500143) | |
| 87-268, gnl|monDom2|scaffold_18 (46500169-46500347) | |
| 87-268, gnl|oryCun1|scaffold_206539 (45442-45231) | |
| 87-268, gnl|oryCun1|scaffold_206539 (45239-45416) | |
| 87-268, gnl|panTro1|chr19_random (42343185-42343409) | |
| 87-268, gnl|panTro1|chr21 (31031225-31031403) | |
| 87-268, gnl|rheMac2|chr16 (32190429-32190653) | |
| 87-268, gnl|rheMac2|chr16 (32190632-32190454) | |
| 87-268, gnl|tetNig1|chr2 (1372616-1372831) | |
| 87-268, gnl|tetNig1|chr2 (1372818-1372641) | |
| 87-268, gnl|xenTro1|scaffold_329 (167692-167916) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 87-268, gnl|bosTau2|chr19 (31163493-31163312) | |
| 87-268, gnl|canFam2|chr9 (27608829-27609039) | |
| 87-268, gnl|canFam2|chr9 (27609032-27608854) | |
| 87-268, gnl|danRer3|chr12 (23500308-23500104) | |
| 87-268, gnl|danRer3|chr12 (23500126-23500303) | |
| 87-268, gnl|fr1|chrUn (226866695-226866896) | |
| 87-268, gnl|fr1|chrUn (226866878-226866701) | |
| 87-268, gnl|hg17|chr17 (43407499-43407723) | |
| 87-268, gnl|Hg17|chr17 (43407522-43407703) | |
| 87-268, gnl|hg17|chr20 (29337789-29337967) | |
| 87-268, gnl|mm7|chr11 (97021461-97021241) | |
| 87-268, gnl|mm7|chr11 (97021258-97021436) | |
| 87-268, gnl|Mm7|chr11 (97021436-97021255) | |
| 87-268, gnl|monDom2|scaffold_18 (46500381-46500143) | |
| 87-268, gnl|monDom2|scaffold_18 (46500169-46500347) | |
| 87-268, gnl|oryCun1|scaffold_206539 (45442-45231) | |
| 87-268, gnl|oryCun1|scaffold_206539 (45239-45416) | |
| 87-268, gnl|panTro1|chr19_random (42343185-42343409) | |
| 87-268, gnl|panTro1|chr21 (31031225-31031403) | |
| 87-268, gnl|rheMac2|chr16 (32190429-32190653) | |
| 87-268, gnl|rheMac2|chr16 (32190632-32190454) | |
| 87-268, gnl|tetNig1|chr2 (1372616-1372831) | |
| 87-268, gnl|tetNig1|chr2 (1372818-1372641) | |
| 87-268, gnl|xenTro1|scaffold_329 (167692-167916) |