Non-Coding RNA Search

Ss1.1-Pig2-28N07.5

Sequence:


               
               GGGGCAGCGTCCCAGCCTCTACTGGCGGCTGTGCTGGAAGTTCATCAGCCCCTGCTTCCT
CCTGTTCGTGGTCGTGGTCAGCATCGCGACCTTCAGGCCCCCGCACTACGGCGCCTACGT
CTTCCCCGAGTGGGCCAACGCGCTGGGCTGGGCCATCGCCGCGTCCTCCATGTCCGTGGC
GCCCGTCTACGCCGCCTACAAGTTCTGCAGCCTGCCCGGGTCCCTGAGGGAGAAACTGGC
CTACGCCATCACGCCAGAGAAGGAGCACGAGCAGCTGGACAGGGGGGAGGTGCGCCAGTT
CACGCTCCGCCACTGGCTGGTGGTGTAGACGGGAGCAGGGAGGAAAACTCGCTGGACACC
GTCCGCGGCAGGACAGACGCAAACGGAGAAGGAAAATGCGCTTCCGGAAGGACCGGCCGC
GCCCGCTCTGTACCTCCTGCTTCGCTTTCCCTCGGATGCTCACGGCCTCCTGCCCGGGGG
CGACCTGACCCGCCGTCGTCCGTGTCATTGTGTAACTTTCGTGGTCTGTGCCTGTCCCGC
AGGCAGAAACATCCCAGTCGCGTTCCGTGCATATAGAGCCGGCTGCCCCCTCCCCGCGTC
CCCCCAGCGGCCCCCGCAGCCGTCCCCTCGCTGCCGTCAAGGGGTGCGCGCGAGAAGGCC
GGTAACTGCGCATCGCGGGCTCTCAGCCGAGAACCCAGCGCTCACAGAGCTTCCCGGGCC
CTTTGTTTGCTCGTGTGAAAAGAGCCAAGTGTCATGTTTTGCCTAATTGTGCAGAGGTGA
CGTGGAGGAGCAGACAAAGGTGACAGTGCAGGACCAGTGTCCTTCCCAGGGGCACTGAGC
GCCCGCGCAGAAAGCCCACGTTGTCGTGTCCGCGTGTCTCCACAGCGGCCTCTGTGTGGT
TGTCACCAACAATAAAGAACCTGACGGGAAAAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGCAGCGTCCCAGCCTCTACTGGCGGCTGTGCTGGAAGTTCATCAGCCCCTGCTTCCT
CCTGTTCGTGGTCGTGGTCAGCATCGCGACCTTCAGGCCCCCGCACTACGGCGCCTACGT
CTTCCCCGAGTGGGCCAACGCGCTGGGCTGGGCCATCGCCGCGTCCTCCATGTCCGTGGC
GCCCGTCTACGCCGCCTACAAGTTCTGCAGCCTGCCCGGGTCCCTGAGGGAGAAACTGGC
CTACGCCATCACGCCAGAGAAGGAGCACGAGCAGCTGGACAGGGGGGAGGTGCGCCAGTT
CACGCTCCGCCACTGGCTGGTGGTGTAGACGGGAGCAGGGAGGAAAACTCGCTGGACACC
GTCCGCGGCAGGACAGACGCAAACGGAGAAGGAAAATGCGCTTCCGGAAGGACCGGCCGC
GCCCGCTCTGTACCTCCTGCTTCGCTTTCCCTCGGATGCTCACGGCCTCCTGCCCGGGGG
CGACCTGACCCGCCGTCGTCCGTGTCATTGTGTAACTTTCGTGGTCTGTGCCTGTCCCGC
AGGCAGAAACATCCCAGTCGCGTTCCGTGCATATAGAGCCGGCTGCCCCCTCCCCGCGTC
CCCCCAGCGGCCCCCGCAGCCGTCCCCTCGCTGCCGTCAAGGGGTGCGCGCGAGAAGGCC
GGTAACTGCGCATCGCGGGCTCTCAGCCGAGAACCCAGCGCTCACAGAGCTTCCCGGGCC
CTTTGTTTGCTCGTGTGAAAAGAGCCAAGTGTCATGTTTTGCCTAATTGTGCAGAGGTGA
CGTGGAGGAGCAGACAAAGGTGACAGTGCAGGACCAGTGTCCTTCCCAGGGGCACTGAGC
GCCCGCGCAGAAAGCCCACGTTGTCGTGTCCGCGTGTCTCCACAGCGGCCTCTGTGTGGT
TGTCACCAACAATAAAGAACCTGACGGGAAAAGAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61884415|ref|XP_597617.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61884415|ref|XP_597617.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               50-232, gnl|bosTau2|chr18 (25083617-25083435)
               

               
               50-232, gnl|Hg17|chr16 (54291527-54291719)
               

               
               50-232, gnl|Mm7|chr8 (91589125-91589300)
               


               
               445-810, gnl|bosTau2|chr20 (42603211-42603581)
               

               
               445-810, gnl|Hg17|chr5 (1447704-1447343)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               50-232, gnl|bosTau2|chr18 (25083617-25083435)
               

               
               50-232, gnl|Hg17|chr16 (54291527-54291719)
               

               
               50-232, gnl|Mm7|chr8 (91589125-91589300)
               


               
               445-810, gnl|bosTau2|chr20 (42603211-42603581)
               

               
               445-810, gnl|Hg17|chr5 (1447704-1447343)

	50-232, gnl\|bosTau2\|chr18 (25083617-25083435)
	50-232, gnl\|Hg17\|chr16 (54291527-54291719)
	50-232, gnl\|Mm7\|chr8 (91589125-91589300)

	445-810, gnl\|bosTau2\|chr20 (42603211-42603581)
	445-810, gnl\|Hg17\|chr5 (1447704-1447343)