Non-Coding RNA Search

Ss1.1-Pig2-29M05.5

Sequence:


               
               CCCACCTGCTCCCCCACCTCTGACTCCGAAAACCTCAGCCCTGATGAGCTGGAGCTGCTG
GCCAAGCTTGAAGAACAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATG
AATGGCTCCCGGCGGAATAGTGGCTCCTCGCTGGTGTCCAGCTCCTCGGCCTCCTCCAAC
CTGAGCCACTTGGAGGAGGACACGTGGATCCTGTGGGGCCGGATCGCTAACGAGTGGGAG
GAATGGCGGCGCAGGAAGGAGAAGCTGCTCAAGGAGCTGATCCGCAAGGGCATCCCGCAC
CACTTCCGGGCCATTGTGTGGCAGCTCCTGTGCAGCGCCACGGACATGCCAGTCAAGAAC
CAGTACTCAGAGCTGCTCAAGATGTCCTCGCCCTGCGAGAAGCTGATCCGCAGGGACATC
GCCCGCACCTACCCGGAGCACGAGTTCTTCAAAGGCCAGGACAGCCTGGGCCAGGAGGTC
CTCTTCAACGTCATGAAGGCCTACTCCCTGGTGGACCGCGAGGTGGGCTACTGCCAGGGC
AGCGCCTTCATCGTGGGCCTGCTCCTCATGCAGATGCCCGAGGAGGAGGCCTTCTGTGTG
TTCGTGCGGCTGATGCAGGAGTACCGCCTGCGGGAGCTCTTCAAGCCCAGTATGGCCGAG
CTGGGGCTCTGCATCTACCAGTTCGAGTACATGCTGCAGGAGCAGCTCCCGGACCTGAAC
ACCCACTTCCGCTCCCAAAGCTTCCACACGTCCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACCTGCTCCCCCACCTCTGACTCCGAAAACCTCAGCCCTGATGAGCTGGAGCTGCTG
GCCAAGCTTGAAGAACAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATG
AATGGCTCCCGGCGGAATAGTGGCTCCTCGCTGGTGTCCAGCTCCTCGGCCTCCTCCAAC
CTGAGCCACTTGGAGGAGGACACGTGGATCCTGTGGGGCCGGATCGCTAACGAGTGGGAG
GAATGGCGGCGCAGGAAGGAGAAGCTGCTCAAGGAGCTGATCCGCAAGGGCATCCCGCAC
CACTTCCGGGCCATTGTGTGGCAGCTCCTGTGCAGCGCCACGGACATGCCAGTCAAGAAC
CAGTACTCAGAGCTGCTCAAGATGTCCTCGCCCTGCGAGAAGCTGATCCGCAGGGACATC
GCCCGCACCTACCCGGAGCACGAGTTCTTCAAAGGCCAGGACAGCCTGGGCCAGGAGGTC
CTCTTCAACGTCATGAAGGCCTACTCCCTGGTGGACCGCGAGGTGGGCTACTGCCAGGGC
AGCGCCTTCATCGTGGGCCTGCTCCTCATGCAGATGCCCGAGGAGGAGGCCTTCTGTGTG
TTCGTGCGGCTGATGCAGGAGTACCGCCTGCGGGAGCTCTTCAAGCCCAGTATGGCCGAG
CTGGGGCTCTGCATCTACCAGTTCGAGTACATGCTGCAGGAGCAGCTCCCGGACCTGAAC
ACCCACTTCCGCTCCCAAAGCTTCCACACGTCCATG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|27777640|ref|NP_705764.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|27777640|ref|NP_705764.2|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               272-499, gnl|bosTau2|chr7 (12527378-12527605)
               

               
               272-499, gnl|Hg17|chr19 (7819805-7820032)
               

               
               272-499, gnl|Mm7|chr8 (4151508-4151735)
               


               
               571-736, gnl|bosTau2|chr7 (12528350-12528519)
               

               
               571-736, gnl|Hg17|chr19 (7820880-7821071)
               

               
               571-736, gnl|Mm7|chr8 (4152553-4152705)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               272-499, gnl|bosTau2|chr7 (12527378-12527605)
               

               
               272-499, gnl|Hg17|chr19 (7819805-7820032)
               

               
               272-499, gnl|Mm7|chr8 (4151508-4151735)
               


               
               571-736, gnl|bosTau2|chr7 (12528350-12528519)
               

               
               571-736, gnl|Hg17|chr19 (7820880-7821071)
               

               
               571-736, gnl|Mm7|chr8 (4152553-4152705)

	272-499, gnl\|bosTau2\|chr7 (12527378-12527605)
	272-499, gnl\|Hg17\|chr19 (7819805-7820032)
	272-499, gnl\|Mm7\|chr8 (4151508-4151735)

	571-736, gnl\|bosTau2\|chr7 (12528350-12528519)
	571-736, gnl\|Hg17\|chr19 (7820880-7821071)
	571-736, gnl\|Mm7\|chr8 (4152553-4152705)