Non-Coding RNA Search

Ss1.1-Pig2-30E16.5

Sequence:


               
               CCTCGGACAGGTTCTGGCGCCCTGCTCGTCCAGTGCTCTGCCGGCCCCCGCCCAGCGCCC
CGGCCCTTCCATGTCACCCGCTCACTCTCTCCGTCGTTCCGACGCCATGGACACCTTTTG
GTGGCGCGCAGCTTGGGGACTCTGCCTCGTGCAGCTGAGCCTGGCGCAGATCGATCTGAA
TATAACCTGCCGATACGCAGGTGTATTCCATGTGGAGAAGAATGGTCGCTACAGCATCTC
GAAGACTGAGGCCGCCTTGACCTTCTGCGAGATTTGGTTGAGGGAAGCTGGAATGGGGGC
TCAGCAGATCTGAGATAAGACTTTCGAGGCAGACTTTCTCACGTCTTCCCGACGAGCTGT
TGGGACCCAGACTTTGCTGGTGAAGAAACTGAGGGATCACAGCGCAAAGGGTTAAGGTGG
GAGAAGTACAGCTGTTTATTAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCGGACAGGTTCTGGCGCCCTGCTCGTCCAGTGCTCTGCCGGCCCCCGCCCAGCGCCC
CGGCCCTTCCATGTCACCCGCTCACTCTCTCCGTCGTTCCGACGCCATGGACACCTTTTG
GTGGCGCGCAGCTTGGGGACTCTGCCTCGTGCAGCTGAGCCTGGCGCAGATCGATCTGAA
TATAACCTGCCGATACGCAGGTGTATTCCATGTGGAGAAGAATGGTCGCTACAGCATCTC
GAAGACTGAGGCCGCCTTGACCTTCTGCGAGATTTGGTTGAGGGAAGCTGGAATGGGGGC
TCAGCAGATCTGAGATAAGACTTTCGAGGCAGACTTTCTCACGTCTTCCCGACGAGCTGT
TGGGACCCAGACTTTGCTGGTGAAGAAACTGAGGGATCACAGCGCAAAGGGTTAAGGTGG
GAGAAGTACAGCTGTTTATTAGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|30353933|gb|AAH52287.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|30353933|gb|AAH52287.1|

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               1-173, gnl|bosTau2|chr15 (39994804-39994631)
               

               
               1-173, gnl|canFam2|chr18 (35847046-35845831)
               

               
               1-173, gnl|hg17|chr11 (35116236-35117504)
               

               
               1-173, gnl|Hg17|chr11 (35117316-35117493)
               

               
               1-173, gnl|mm7|chr2 (102753155-102752045)
               

               
               1-173, gnl|Mm7|chr2 (102752223-102752055)
               

               
               1-173, gnl|panTro1|chr9 (35542344-35543614)
               

               
               1-173, gnl|rheMac2|chr14 (36698794-36697518)
               

               
               1-173, gnl|rn3|chr3 (88007583-88006583)
               


               
               255-444, gnl|bosTau2|chr15 (39907272-39907460)
               

               
               255-444, gnl|Hg17|chr11 (35208312-35208118)
               

               
               255-444, gnl|Mm7|chr2 (102664019-102664200)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-173, gnl|bosTau2|chr15 (39994804-39994631)
               

               
               1-173, gnl|canFam2|chr18 (35847046-35845831)
               

               
               1-173, gnl|hg17|chr11 (35116236-35117504)
               

               
               1-173, gnl|Hg17|chr11 (35117316-35117493)
               

               
               1-173, gnl|mm7|chr2 (102753155-102752045)
               

               
               1-173, gnl|Mm7|chr2 (102752223-102752055)
               

               
               1-173, gnl|panTro1|chr9 (35542344-35543614)
               

               
               1-173, gnl|rheMac2|chr14 (36698794-36697518)
               

               
               1-173, gnl|rn3|chr3 (88007583-88006583)
               


               
               255-444, gnl|bosTau2|chr15 (39907272-39907460)
               

               
               255-444, gnl|Hg17|chr11 (35208312-35208118)
               

               
               255-444, gnl|Mm7|chr2 (102664019-102664200)

	1-173, gnl\|bosTau2\|chr15 (39994804-39994631)
	1-173, gnl\|canFam2\|chr18 (35847046-35845831)
	1-173, gnl\|hg17\|chr11 (35116236-35117504)
	1-173, gnl\|Hg17\|chr11 (35117316-35117493)
	1-173, gnl\|mm7\|chr2 (102753155-102752045)
	1-173, gnl\|Mm7\|chr2 (102752223-102752055)
	1-173, gnl\|panTro1\|chr9 (35542344-35543614)
	1-173, gnl\|rheMac2\|chr14 (36698794-36697518)
	1-173, gnl\|rn3\|chr3 (88007583-88006583)

	255-444, gnl\|bosTau2\|chr15 (39907272-39907460)
	255-444, gnl\|Hg17\|chr11 (35208312-35208118)
	255-444, gnl\|Mm7\|chr2 (102664019-102664200)