Ss1.1-Pig2-31A05.5
|
GCCATCGCCCAGCAGAAGCAGAGTTGGCCGTGGGAGGCCTTGGGTTCCCTGGGAGTCCCT
GCCTTGCCTTGTGACCGAGCTTCCCTTCCGTCTCTGGGATCCTTCTTGGGAGGTGCTCGT
CCGTTAGGCGTGGGTTCNTGCATCCCATCCCTGGGGTGCCCCTACCCCGCGCCCCGGCCG
GGGAGGCAGACATGGCCCCCATGAGGAAGAAGAGCACCCTCAAGCTGCTCACGCTCCTGG
TCCTCTTCATCTTCCTCACCTCCTTCTTCCTCAACTACTCGCACACCGTGGTCACCACCG
CCTGGTTCCCCAAGCAGATGGTCATCGAGCTCTCCGAGAACTTCAAGAAGCTCATGAAAT
ACCCCTACAGGCCCTGCACCTGCACCCGCTGCATCGAAGAGCAGAGGGTCTCCGCCTGGT
TCGATGAGCGATTCAACCGGTCCATGCAGCCGCTGCTGACGGCCAAGAACGCTCTCCTGG
AGGAAGACACTTACAAGTGGTGGCTGAGGCTCCAGCGGGAGAAGCAGCCCAATAACTTGA
ACGACACCATCAGGGAGCTGTTCCAGGTGGTGCCTGGGAACGTGGACCCCCTGCTGGAGA
AGAGGCTGGTCAGCTGCCGGCGCTGCGCCGTCGTGGGCAACTCGGGCAACCTGAAGGAGT
CCTACTACGGGCCTCAAATAGACAGCCACGACTTCGTGCTGAGGATGAACAAGGCCCCCA
CGGAGGGGTTGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCATCGCCCAGCAGAAGCAGAGTTGGCCGTGGGAGGCCTTGGGTTCCCTGGGAGTCCCT
GCCTTGCCTTGTGACCGAGCTTCCCTTCCGTCTCTGGGATCCTTCTTGGGAGGTGCTCGT
CCGTTAGGCGTGGGTTCNTGCATCCCATCCCTGGGGTGCCCCTACCCCGCGCCCCGGCCG
GGGAGGCAGACATGGCCCCCATGAGGAAGAAGAGCACCCTCAAGCTGCTCACGCTCCTGG
TCCTCTTCATCTTCCTCACCTCCTTCTTCCTCAACTACTCGCACACCGTGGTCACCACCG
CCTGGTTCCCCAAGCAGATGGTCATCGAGCTCTCCGAGAACTTCAAGAAGCTCATGAAAT
ACCCCTACAGGCCCTGCACCTGCACCCGCTGCATCGAAGAGCAGAGGGTCTCCGCCTGGT
TCGATGAGCGATTCAACCGGTCCATGCAGCCGCTGCTGACGGCCAAGAACGCTCTCCTGG
AGGAAGACACTTACAAGTGGTGGCTGAGGCTCCAGCGGGAGAAGCAGCCCAATAACTTGA
ACGACACCATCAGGGAGCTGTTCCAGGTGGTGCCTGGGAACGTGGACCCCCTGCTGGAGA
AGAGGCTGGTCAGCTGCCGGCGCTGCGCCGTCGTGGGCAACTCGGGCAACCTGAAGGAGT
CCTACTACGGGCCTCAAATAGACAGCCACGACTTCGTGCTGAGGATGAACAAGGCCCCCA
CGGAGGGGTTGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
18-506, gnl|bosTau2|chr14 (3621742-3622215) |
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18-506, gnl|canFam2|chr13 (32908089-32908382) |
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18-506, gnl|dasNov1|scaffold_93043 (1056-1353) |
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18-506, gnl|fr1|chrUn (21078850-21079120) |
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18-506, gnl|galGal2|chr2 (141685649-141685349) |
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18-506, gnl|hg17|chr8 (134557132-134557426) |
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18-506, gnl|Hg17|chr8 (134557612-134557144) |
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18-506, gnl|loxAfr1|scaffold_31159 (36606-36898) |
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18-506, gnl|mm7|chr15 (67197182-67197469) |
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18-506, gnl|Mm7|chr15 (67197670-67197187) |
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18-506, gnl|monDom2|scaffold_3 (16565618-16565315) |
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18-506, gnl|oryCun1|scaffold_173141 (7559-7853) |
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18-506, gnl|panTro1|chr7 (137536115-137536410) |
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18-506, gnl|rheMac2|chr8 (136041128-136041422) |
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18-506, gnl|rn3|chr7 (104508265-104508552) |
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18-506, gnl|tetNig1|chrUn_random (98883456-98883149) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
18-506, gnl|bosTau2|chr14 (3621742-3622215) |
|
18-506, gnl|canFam2|chr13 (32908089-32908382) |
|
18-506, gnl|dasNov1|scaffold_93043 (1056-1353) |
|
18-506, gnl|fr1|chrUn (21078850-21079120) |
|
18-506, gnl|galGal2|chr2 (141685649-141685349) |
|
18-506, gnl|hg17|chr8 (134557132-134557426) |
|
18-506, gnl|Hg17|chr8 (134557612-134557144) |
|
18-506, gnl|loxAfr1|scaffold_31159 (36606-36898) |
|
18-506, gnl|mm7|chr15 (67197182-67197469) |
|
18-506, gnl|Mm7|chr15 (67197670-67197187) |
|
18-506, gnl|monDom2|scaffold_3 (16565618-16565315) |
|
18-506, gnl|oryCun1|scaffold_173141 (7559-7853) |
|
18-506, gnl|panTro1|chr7 (137536115-137536410) |
|
18-506, gnl|rheMac2|chr8 (136041128-136041422) |
|
18-506, gnl|rn3|chr7 (104508265-104508552) |
|
18-506, gnl|tetNig1|chrUn_random (98883456-98883149) |
