Ss1.1-Pig2-31E01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCAAGATCAACATCATGAACATGAACAAGCAAAGCAAGCTGTACTCGCAGGGCATGGCC CCCTTCGTGCGCACACTGCCCACCCGGCCCCGCTGGGAGCGCATTCGAGACCGGCCCACC TTTGAGATGACGGAGACGCAGTTTGTGTTATCCTTTGTTCACCGTTTCGTGGAAGGCCGT GGGGCCACCACCTTCTTCGCCTTCTGCTACCCCTTCTCCTACAGTGACTGCCAAGATCTG CTCAACCAACTAGACCAGCGCTTTCTGGAGAACCACGCTACCCACACCAGCCCCCTGGAC ACCATCTATTATCACCGGGAGATCCTTTGCTATTCTCTGGATGGACTTCGTGTCGATCTG CTAACGATCAGTTCCTGCCACGGGATCCGAGAAGATCGCGAGCCCCGCTTAGAGCAGCTC TTCCCTGATAGCGGCACTCCGCGCCCGTTCCGTTTCACAGGCAAGAGGATATTCTTCTTA AGCAGCAGGGTACACCCCGGGGAGACGCCATCTAGCTTTGTCTTCAATGGCTTTCTGGAC TTCATCCTTCGACCCGACGACCCCCGGGCCCAAACTCTGCGTCGCCTCTTTGTCTTTAAG CTGATTCCCATGTTGAACCCCGACGGTGTGGTCCGGGGCCACTACCGCACAGACTCGCGT GGAGTGAACCTGAACCGCCAGTACCTGAAGCCCGACGCGGTCCTGCACCCGGCCATCTAC GGGGCCAAAGCTGTGCTCCTCTACCACCATGTGCACTCCCGCCTGAGCTCCCACGGGCCC TCCGAGCACCAGCACAGTCCCCACCCGCCTCCTGCTGCGCCCCTTTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCAAGATCAACATCATGAACATGAACAAGCAAAGCAAGCTGTACTCGCAGGGCATGGCC CCCTTCGTGCGCACACTGCCCACCCGGCCCCGCTGGGAGCGCATTCGAGACCGGCCCACC TTTGAGATGACGGAGACGCAGTTTGTGTTATCCTTTGTTCACCGTTTCGTGGAAGGCCGT GGGGCCACCACCTTCTTCGCCTTCTGCTACCCCTTCTCCTACAGTGACTGCCAAGATCTG CTCAACCAACTAGACCAGCGCTTTCTGGAGAACCACGCTACCCACACCAGCCCCCTGGAC ACCATCTATTATCACCGGGAGATCCTTTGCTATTCTCTGGATGGACTTCGTGTCGATCTG CTAACGATCAGTTCCTGCCACGGGATCCGAGAAGATCGCGAGCCCCGCTTAGAGCAGCTC TTCCCTGATAGCGGCACTCCGCGCCCGTTCCGTTTCACAGGCAAGAGGATATTCTTCTTA AGCAGCAGGGTACACCCCGGGGAGACGCCATCTAGCTTTGTCTTCAATGGCTTTCTGGAC TTCATCCTTCGACCCGACGACCCCCGGGCCCAAACTCTGCGTCGCCTCTTTGTCTTTAAG CTGATTCCCATGTTGAACCCCGACGGTGTGGTCCGGGGCCACTACCGCACAGACTCGCGT GGAGTGAACCTGAACCGCCAGTACCTGAAGCCCGACGCGGTCCTGCACCCGGCCATCTAC GGGGCCAAAGCTGTGCTCCTCTACCACCATGTGCACTCCCGCCTGAGCTCCCACGGGCCC TCCGAGCACCAGCACAGTCCCCACCCGCCTCCTGCTGCGCCCCTTTCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 468-586, - strand, RNAz p=0.631059 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 468-586, - strand, RNAz p=0.631059 |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 1-126, gnl|bosTau2|chr11 (53015232-53015357) | |
| 1-126, gnl|canFam2|chr17 (24029353-24029550) | |
| 1-126, gnl|danRer3|chr4 (673771-673595) | |
| 1-126, gnl|dasNov1|scaffold_206699 (273-76) | |
| 1-126, gnl|echTel1|scaffold_311276 (96079-95877) | |
| 1-126, gnl|fr1|chrUn (12393724-12393527) | |
| 1-126, gnl|hg17|chr2 (27187919-27188116) | |
| 1-126, gnl|Hg17|chr2 (27187967-27188092) | |
| 1-126, gnl|loxAfr1|scaffold_2034 (60951-60754) | |
| 1-126, gnl|mm7|chr5 (29923113-29923309) | |
| 1-126, gnl|Mm7|chr5 (29923161-29923286) | |
| 1-126, gnl|monDom2|scaffold_1 (149245188-149244990) | |
| 1-126, gnl|oryCun1|scaffold_212490 (100955-101151) | |
| 1-126, gnl|panTro1|chr12 (28123922-28124119) | |
| 1-126, gnl|rheMac2|chr13 (27006940-27007137) | |
| 1-126, gnl|rn3|chr6 (25474843-25474647) | |
| 1-126, gnl|tetNig1|chr14 (8003847-8003653) | |
| 1-126, gnl|xenTro1|scaffold_766 (343710-343515) | |
| 288-467, gnl|bosTau2|chr11 (53016454-53016633) | |
| 288-467, gnl|canFam2|chr17 (24030531-24030735) | |
| 288-467, gnl|danRer3|chr4 (672139-671953) | |
| 288-467, gnl|dasNov1|scaffold_104935 (2079-2259) | |
| 288-467, gnl|echTel1|scaffold_311276 (94869-94665) | |
| 288-467, gnl|fr1|chrUn (12393206-12392996) | |
| 288-467, gnl|galGal2|chr3 (102664031-102664231) | |
| 288-467, gnl|hg17|chr2 (27189136-27189339) | |
| 288-467, gnl|Hg17|chr2 (27189146-27189325) | |
| 288-467, gnl|loxAfr1|scaffold_2034 (59765-59561) | |
| 288-467, gnl|mm7|chr5 (29924315-29924507) | |
| 288-467, gnl|Mm7|chr5 (29924326-29924505) | |
| 288-467, gnl|monDom2|scaffold_1 (149243750-149243547) | |
| 288-467, gnl|oryCun1|scaffold_212490 (102062-102266) | |
| 288-467, gnl|panTro1|chr12 (28125141-28125344) | |
| 288-467, gnl|rheMac2|chr13 (27008149-27008352) | |
| 288-467, gnl|rn3|chr6 (25473476-25473272) | |
| 288-467, gnl|tetNig1|chr14 (8003124-8002938) | |
| 288-467, gnl|xenTro1|scaffold_766 (341318-341108) | |
| 468-647, gnl|bosTau2|chr11 (53016900-53017079) | |
| 468-647, gnl|canFam2|chr17 (24030983-24031204) | |
| 468-647, gnl|danRer3|chr4 (671378-671171) | |
| 468-647, gnl|dasNov1|scaffold_104935 (2260-2429) | |
| 468-647, gnl|echTel1|scaffold_311276 (94452-94252) | |
| 468-647, gnl|fr1|chrUn (12392929-12392743) | |
| 468-647, gnl|galGal2|chr3 (102664336-102664533) | |
| 468-647, gnl|hg17|chr2 (27189591-27189812) | |
| 468-647, gnl|Hg17|chr2 (27189593-27189772) | |
| 468-647, gnl|loxAfr1|scaffold_2034 (59305-59084) | |
| 468-647, gnl|mm7|chr5 (29924951-29925164) | |
| 468-647, gnl|Mm7|chr5 (29924953-29925132) | |
| 468-647, gnl|monDom2|scaffold_1 (149243309-149243084) | |
| 468-647, gnl|oryCun1|scaffold_212490 (102500-102705) | |
| 468-647, gnl|panTro1|chr12 (28125596-28125817) | |
| 468-647, gnl|rheMac2|chr13 (27008604-27008825) | |
| 468-647, gnl|rn3|chr6 (25472857-25472644) | |
| 468-647, gnl|tetNig1|chr14 (8002842-8002649) | |
| 468-647, gnl|xenTro1|scaffold_766 (338425-338237) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-126, gnl|bosTau2|chr11 (53015232-53015357) | |
| 1-126, gnl|canFam2|chr17 (24029353-24029550) | |
| 1-126, gnl|danRer3|chr4 (673771-673595) | |
| 1-126, gnl|dasNov1|scaffold_206699 (273-76) | |
| 1-126, gnl|echTel1|scaffold_311276 (96079-95877) | |
| 1-126, gnl|fr1|chrUn (12393724-12393527) | |
| 1-126, gnl|hg17|chr2 (27187919-27188116) | |
| 1-126, gnl|Hg17|chr2 (27187967-27188092) | |
| 1-126, gnl|loxAfr1|scaffold_2034 (60951-60754) | |
| 1-126, gnl|mm7|chr5 (29923113-29923309) | |
| 1-126, gnl|Mm7|chr5 (29923161-29923286) | |
| 1-126, gnl|monDom2|scaffold_1 (149245188-149244990) | |
| 1-126, gnl|oryCun1|scaffold_212490 (100955-101151) | |
| 1-126, gnl|panTro1|chr12 (28123922-28124119) | |
| 1-126, gnl|rheMac2|chr13 (27006940-27007137) | |
| 1-126, gnl|rn3|chr6 (25474843-25474647) | |
| 1-126, gnl|tetNig1|chr14 (8003847-8003653) | |
| 1-126, gnl|xenTro1|scaffold_766 (343710-343515) | |
| 288-467, gnl|bosTau2|chr11 (53016454-53016633) | |
| 288-467, gnl|canFam2|chr17 (24030531-24030735) | |
| 288-467, gnl|danRer3|chr4 (672139-671953) | |
| 288-467, gnl|dasNov1|scaffold_104935 (2079-2259) | |
| 288-467, gnl|echTel1|scaffold_311276 (94869-94665) | |
| 288-467, gnl|fr1|chrUn (12393206-12392996) | |
| 288-467, gnl|galGal2|chr3 (102664031-102664231) | |
| 288-467, gnl|hg17|chr2 (27189136-27189339) | |
| 288-467, gnl|Hg17|chr2 (27189146-27189325) | |
| 288-467, gnl|loxAfr1|scaffold_2034 (59765-59561) | |
| 288-467, gnl|mm7|chr5 (29924315-29924507) | |
| 288-467, gnl|Mm7|chr5 (29924326-29924505) | |
| 288-467, gnl|monDom2|scaffold_1 (149243750-149243547) | |
| 288-467, gnl|oryCun1|scaffold_212490 (102062-102266) | |
| 288-467, gnl|panTro1|chr12 (28125141-28125344) | |
| 288-467, gnl|rheMac2|chr13 (27008149-27008352) | |
| 288-467, gnl|rn3|chr6 (25473476-25473272) | |
| 288-467, gnl|tetNig1|chr14 (8003124-8002938) | |
| 288-467, gnl|xenTro1|scaffold_766 (341318-341108) | |
| 468-647, gnl|bosTau2|chr11 (53016900-53017079) | |
| 468-647, gnl|canFam2|chr17 (24030983-24031204) | |
| 468-647, gnl|danRer3|chr4 (671378-671171) | |
| 468-647, gnl|dasNov1|scaffold_104935 (2260-2429) | |
| 468-647, gnl|echTel1|scaffold_311276 (94452-94252) | |
| 468-647, gnl|fr1|chrUn (12392929-12392743) | |
| 468-647, gnl|galGal2|chr3 (102664336-102664533) | |
| 468-647, gnl|hg17|chr2 (27189591-27189812) | |
| 468-647, gnl|Hg17|chr2 (27189593-27189772) | |
| 468-647, gnl|loxAfr1|scaffold_2034 (59305-59084) | |
| 468-647, gnl|mm7|chr5 (29924951-29925164) | |
| 468-647, gnl|Mm7|chr5 (29924953-29925132) | |
| 468-647, gnl|monDom2|scaffold_1 (149243309-149243084) | |
| 468-647, gnl|oryCun1|scaffold_212490 (102500-102705) | |
| 468-647, gnl|panTro1|chr12 (28125596-28125817) | |
| 468-647, gnl|rheMac2|chr13 (27008604-27008825) | |
| 468-647, gnl|rn3|chr6 (25472857-25472644) | |
| 468-647, gnl|tetNig1|chr14 (8002842-8002649) | |
| 468-647, gnl|xenTro1|scaffold_766 (338425-338237) |