Ss1.1-Pig2-32C22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTTTACCTGTGACAGGACCCTGCTGCAGGAGGACTACGGGTTCTTCCGTGCCATCAGCC TGTGGCCCCCGCTGGTGCTGATCGGCATCTACGCCACATCGCTCTCAGCCTCCATGAGCT CCCTCATCGGTGCCTCCCGCATCCTCCACGCCCTGGCCCAGGACGACCTCTTTGGAGTGA TCCTTTCACCGGCCAAGGTCGTATCCCGAGGGGGGAACCCCTGGGGGGCTGTGCTCTATT CTTGGGGCTTGGTGCAGCTGGTGCTCCTGGCTGGGAAGCTGAACACACTGGCCGCCGTGG TCACTGTCTTCTACTTGGTGGCCTATGCTGCCGTGGACCTGTCCTGCCTGAGCCTGGAGT GGGCCTCGGCCCCCAACTTCCGCCCCACCTTCAGCCTCTTCTCCTGGCACACCTGCTTGC TGGGCGTGGCCTCCTGCCTGCTCATGATGTTTCTCATCAGCCCCGGGGCTGCCGGCGGCT CCCTGCTTCTCATGGGCCTGCTTTCTGCCCTGCTCACAGCGCGAGTAGGCCCCAGCAGCT GGGGCTACGTCAGCCAGGCTCTGCTTTTCCACCAGGTACGTAAATACCTGCTCCGGCTGG ACGTCCGCAAAGACCACGTGAAGTTTTGGCGGCCCCAGCTGCTGCTCCTGGTGGGGAACC CCCGGGGCGCACTGCCTCTGCTGCGGTTGGCGAACCAGCTCAAGAAAGGGGGCCTCTATG TGCTGGGCCACGTCACCCTGGGGGACCTCGACTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTTTACCTGTGACAGGACCCTGCTGCAGGAGGACTACGGGTTCTTCCGTGCCATCAGCC TGTGGCCCCCGCTGGTGCTGATCGGCATCTACGCCACATCGCTCTCAGCCTCCATGAGCT CCCTCATCGGTGCCTCCCGCATCCTCCACGCCCTGGCCCAGGACGACCTCTTTGGAGTGA TCCTTTCACCGGCCAAGGTCGTATCCCGAGGGGGGAACCCCTGGGGGGCTGTGCTCTATT CTTGGGGCTTGGTGCAGCTGGTGCTCCTGGCTGGGAAGCTGAACACACTGGCCGCCGTGG TCACTGTCTTCTACTTGGTGGCCTATGCTGCCGTGGACCTGTCCTGCCTGAGCCTGGAGT GGGCCTCGGCCCCCAACTTCCGCCCCACCTTCAGCCTCTTCTCCTGGCACACCTGCTTGC TGGGCGTGGCCTCCTGCCTGCTCATGATGTTTCTCATCAGCCCCGGGGCTGCCGGCGGCT CCCTGCTTCTCATGGGCCTGCTTTCTGCCCTGCTCACAGCGCGAGTAGGCCCCAGCAGCT GGGGCTACGTCAGCCAGGCTCTGCTTTTCCACCAGGTACGTAAATACCTGCTCCGGCTGG ACGTCCGCAAAGACCACGTGAAGTTTTGGCGGCCCCAGCTGCTGCTCCTGGTGGGGAACC CCCGGGGCGCACTGCCTCTGCTGCGGTTGGCGAACCAGCTCAAGAAAGGGGGCCTCTATG TGCTGGGCCACGTCACCCTGGGGGACCTCGACTCCC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 559-664, - strand, RNAz p=0.568802 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 559-664, - strand, RNAz p=0.568802 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 21-175, gnl|bosTau2|chr25 (32204469-32204315) | |
| 21-175, gnl|canFam2|chr6 (11908212-11908033) | |
| 21-175, gnl|danRer3|chr5 (38663355-38663531) | |
| 21-175, gnl|dasNov1|scaffold_138059 (783-964) | |
| 21-175, gnl|echTel1|scaffold_198517 (3610-3429) | |
| 21-175, gnl|fr1|chrUn (49522306-49522130) | |
| 21-175, gnl|galGal2|chr9 (14942792-14942613) | |
| 21-175, gnl|hg17|chr7 (100102149-100102327) | |
| 21-175, gnl|Hg17|chr7 (100102162-100102316) | |
| 21-175, gnl|loxAfr1|scaffold_82703 (4164-4345) | |
| 21-175, gnl|mm7|chr5 (136243953-136243772) | |
| 21-175, gnl|Mm7|chr5 (136243938-136243784) | |
| 21-175, gnl|monDom2|scaffold_66 (2733528-2733715) | |
| 21-175, gnl|oryCun1|scaffold_166716 (4767-4584) | |
| 21-175, gnl|panTro1|chr6 (101877943-101878121) | |
| 21-175, gnl|rheMac2|chr3 (48149928-48150106) | |
| 21-175, gnl|tetNig1|chr7 (5032038-5031866) | |
| 21-175, gnl|xenTro1|scaffold_1307 (11761-11552) | |
| 242-382, gnl|bosTau2|chr25 (32203991-32203851) | |
| 242-382, gnl|Hg17|chr7 (100103395-100103535) | |
| 242-382, gnl|Mm7|chr5 (136241453-136241315) | |
| 559-750, gnl|bosTau2|chr25 (32203475-32203285) | |
| 559-750, gnl|canFam2|chr6 (11907069-11906939) | |
| 559-750, gnl|danRer3|chr5 (38673457-38673572) | |
| 559-750, gnl|dasNov1|scaffold_138059 (1957-2087) | |
| 559-750, gnl|echTel1|scaffold_198517 (2266-2138) | |
| 559-750, gnl|fr1|chrUn (49521407-49521279) | |
| 559-750, gnl|galGal2|chr9 (14940230-14940097) | |
| 559-750, gnl|hg17|chr7 (100103990-100104123) | |
| 559-750, gnl|Hg17|chr7 (100103990-100104184) | |
| 559-750, gnl|loxAfr1|scaffold_111343 (1112-979) | |
| 559-750, gnl|mm7|chr5 (136240857-136240727) | |
| 559-750, gnl|Mm7|chr5 (136240855-136240664) | |
| 559-750, gnl|monDom2|scaffold_66 (2735167-2735292) | |
| 559-750, gnl|oryCun1|scaffold_166716 (3747-3622) | |
| 559-750, gnl|panTro1|chr6 (101879845-101879978) | |
| 559-750, gnl|rheMac2|chr3 (48151738-48151871) | |
| 559-750, gnl|tetNig1|chr7 (5031128-5030997) | |
| 559-750, gnl|xenTro1|scaffold_1307 (6570-6453) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-175, gnl|bosTau2|chr25 (32204469-32204315) | |
| 21-175, gnl|canFam2|chr6 (11908212-11908033) | |
| 21-175, gnl|danRer3|chr5 (38663355-38663531) | |
| 21-175, gnl|dasNov1|scaffold_138059 (783-964) | |
| 21-175, gnl|echTel1|scaffold_198517 (3610-3429) | |
| 21-175, gnl|fr1|chrUn (49522306-49522130) | |
| 21-175, gnl|galGal2|chr9 (14942792-14942613) | |
| 21-175, gnl|hg17|chr7 (100102149-100102327) | |
| 21-175, gnl|Hg17|chr7 (100102162-100102316) | |
| 21-175, gnl|loxAfr1|scaffold_82703 (4164-4345) | |
| 21-175, gnl|mm7|chr5 (136243953-136243772) | |
| 21-175, gnl|Mm7|chr5 (136243938-136243784) | |
| 21-175, gnl|monDom2|scaffold_66 (2733528-2733715) | |
| 21-175, gnl|oryCun1|scaffold_166716 (4767-4584) | |
| 21-175, gnl|panTro1|chr6 (101877943-101878121) | |
| 21-175, gnl|rheMac2|chr3 (48149928-48150106) | |
| 21-175, gnl|tetNig1|chr7 (5032038-5031866) | |
| 21-175, gnl|xenTro1|scaffold_1307 (11761-11552) | |
| 242-382, gnl|bosTau2|chr25 (32203991-32203851) | |
| 242-382, gnl|Hg17|chr7 (100103395-100103535) | |
| 242-382, gnl|Mm7|chr5 (136241453-136241315) | |
| 559-750, gnl|bosTau2|chr25 (32203475-32203285) | |
| 559-750, gnl|canFam2|chr6 (11907069-11906939) | |
| 559-750, gnl|danRer3|chr5 (38673457-38673572) | |
| 559-750, gnl|dasNov1|scaffold_138059 (1957-2087) | |
| 559-750, gnl|echTel1|scaffold_198517 (2266-2138) | |
| 559-750, gnl|fr1|chrUn (49521407-49521279) | |
| 559-750, gnl|galGal2|chr9 (14940230-14940097) | |
| 559-750, gnl|hg17|chr7 (100103990-100104123) | |
| 559-750, gnl|Hg17|chr7 (100103990-100104184) | |
| 559-750, gnl|loxAfr1|scaffold_111343 (1112-979) | |
| 559-750, gnl|mm7|chr5 (136240857-136240727) | |
| 559-750, gnl|Mm7|chr5 (136240855-136240664) | |
| 559-750, gnl|monDom2|scaffold_66 (2735167-2735292) | |
| 559-750, gnl|oryCun1|scaffold_166716 (3747-3622) | |
| 559-750, gnl|panTro1|chr6 (101879845-101879978) | |
| 559-750, gnl|rheMac2|chr3 (48151738-48151871) | |
| 559-750, gnl|tetNig1|chr7 (5031128-5030997) | |
| 559-750, gnl|xenTro1|scaffold_1307 (6570-6453) |