Ss1.1-Pig2-33E12.5
|
TCCAGCTGTGTCTGCACAGGGGCCTGGAATGAGATGGTGACTCATCCTGGCTACTACGCT
GAGCTGGTGGAGAAGTCCACTGGGAAGTACAGCCTGGCCACAGAGGAGATCGAGCGAGAC
CTCCACCGCTCCATGCCTGAGCACCCCGCCTTCCAGAACGAGCTGGGGATCGCTGCACTC
CGCCGGGTGCTGACCGCCTACGCTTTCCGAAACCCCACCATCGGCTACTGCCAGGTACAG
GGGCTCGGCAGGGGCCAGAGGCAGCCCCTCCCATCAGAGGCTCACAGGAGCAGCTTGCCA
CGGCCCTGGGCCTGAGTGATGACCTCACACACCTTTGGTTGTGCCCTCGTGGGAGCCCTG
GTGGACCAAGGCATCTTCGAAGAGCTCACGAGAGACTTCCTGCCGCAGCTCTCTGAGAAG
ATGCAGGACCTGGGCGTGATTTCCAGCATCTCACTCTCCTGGTTCCTGACCCTCTTCCTC
AGCGTCATGCCCTTTGAGAGCGCTGTGGTCATTGTTGACTGCTTCTTCTATGAGGGCATC
AAGGTGATCCTGCAGGTGGCCTTGGCCATTCTGGATGCCAACATGGAGCAGCTGCTGGGC
TGCAGCGACGAGGGCGAGGCCATGACCGTCCTGGGCAGATACCTGGATAATGTGGTCAAT
AAGCAGAGCGTCTCTCCTCCCATCCCCCACCTCCATGCCCTGCTGACCAGCGGGGACAAG
CCTCCTGAAGAGGTGGACATCTTCGACCTCCTGAAGGTGTCGTATGAGAAATTCAGCAGC
CTGAGGGCCGAGGACATTGAACAGATGCGGTTTAAACAGCGGCTGAAAGTCATCCAGTCC
TTGGAGGATACGGCCAAGAGGAGTGTGGTCCGAGCTATACCTGGGGACATCGGTTTCTCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCCAGCTGTGTCTGCACAGGGGCCTGGAATGAGATGGTGACTCATCCTGGCTACTACGCT
GAGCTGGTGGAGAAGTCCACTGGGAAGTACAGCCTGGCCACAGAGGAGATCGAGCGAGAC
CTCCACCGCTCCATGCCTGAGCACCCCGCCTTCCAGAACGAGCTGGGGATCGCTGCACTC
CGCCGGGTGCTGACCGCCTACGCTTTCCGAAACCCCACCATCGGCTACTGCCAGGTACAG
GGGCTCGGCAGGGGCCAGAGGCAGCCCCTCCCATCAGAGGCTCACAGGAGCAGCTTGCCA
CGGCCCTGGGCCTGAGTGATGACCTCACACACCTTTGGTTGTGCCCTCGTGGGAGCCCTG
GTGGACCAAGGCATCTTCGAAGAGCTCACGAGAGACTTCCTGCCGCAGCTCTCTGAGAAG
ATGCAGGACCTGGGCGTGATTTCCAGCATCTCACTCTCCTGGTTCCTGACCCTCTTCCTC
AGCGTCATGCCCTTTGAGAGCGCTGTGGTCATTGTTGACTGCTTCTTCTATGAGGGCATC
AAGGTGATCCTGCAGGTGGCCTTGGCCATTCTGGATGCCAACATGGAGCAGCTGCTGGGC
TGCAGCGACGAGGGCGAGGCCATGACCGTCCTGGGCAGATACCTGGATAATGTGGTCAAT
AAGCAGAGCGTCTCTCCTCCCATCCCCCACCTCCATGCCCTGCTGACCAGCGGGGACAAG
CCTCCTGAAGAGGTGGACATCTTCGACCTCCTGAAGGTGTCGTATGAGAAATTCAGCAGC
CTGAGGGCCGAGGACATTGAACAGATGCGGTTTAAACAGCGGCTGAAAGTCATCCAGTCC
TTGGAGGATACGGCCAAGAGGAGTGTGGTCCGAGCTATACCTGGGGACATCGGTTTCTCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
3-255, gnl|bosTau2|chr7 (620389-620137) |
|
3-255, gnl|Hg17|chr5 (179238146-179237858) |
|
3-255, gnl|Mm7|chr11 (50109364-50109616) |
| |
|
334-641, gnl|bosTau2|chr17 (10557449-10557140) |
|
334-641, gnl|canFam2|chr19 (5230122-5229886) |
|
334-641, gnl|danRer3|chr1 (52403466-52403698) |
|
334-641, gnl|dasNov1|scaffold_928 (91710-91936) |
|
334-641, gnl|echTel1|scaffold_288136 (115555-115323) |
|
334-641, gnl|fr1|chrUn (194138309-194138077) |
|
334-641, gnl|galGal2|chr4 (30204375-30204610) |
|
334-641, gnl|hg17|chr4 (141936279-141936516) |
|
334-641, gnl|Hg17|chr4 (141936593-141936283) |
|
334-641, gnl|loxAfr1|scaffold_1307 (87260-87023) |
|
334-641, gnl|mm7|chr8 (81823840-81823603) |
|
334-641, gnl|Mm7|chr8 (81823526-81823834) |
|
334-641, gnl|monDom2|scaffold_9 (8593760-8593996) |
|
334-641, gnl|oryCun1|scaffold_210994 (147256-147019) |
|
334-641, gnl|panTro1|chr3 (159197021-159197258) |
|
334-641, gnl|rheMac2|chr5 (133110983-133111220) |
|
334-641, gnl|rn3|chr19 (26594732-26594968) |
|
334-641, gnl|tetNig1|chr18 (6610630-6610860) |
|
334-641, gnl|xenTro1|scaffold_429 (767264-767497) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-255, gnl|bosTau2|chr7 (620389-620137) |
|
3-255, gnl|Hg17|chr5 (179238146-179237858) |
|
3-255, gnl|Mm7|chr11 (50109364-50109616) |
| |
|
334-641, gnl|bosTau2|chr17 (10557449-10557140) |
|
334-641, gnl|canFam2|chr19 (5230122-5229886) |
|
334-641, gnl|danRer3|chr1 (52403466-52403698) |
|
334-641, gnl|dasNov1|scaffold_928 (91710-91936) |
|
334-641, gnl|echTel1|scaffold_288136 (115555-115323) |
|
334-641, gnl|fr1|chrUn (194138309-194138077) |
|
334-641, gnl|galGal2|chr4 (30204375-30204610) |
|
334-641, gnl|hg17|chr4 (141936279-141936516) |
|
334-641, gnl|Hg17|chr4 (141936593-141936283) |
|
334-641, gnl|loxAfr1|scaffold_1307 (87260-87023) |
|
334-641, gnl|mm7|chr8 (81823840-81823603) |
|
334-641, gnl|Mm7|chr8 (81823526-81823834) |
|
334-641, gnl|monDom2|scaffold_9 (8593760-8593996) |
|
334-641, gnl|oryCun1|scaffold_210994 (147256-147019) |
|
334-641, gnl|panTro1|chr3 (159197021-159197258) |
|
334-641, gnl|rheMac2|chr5 (133110983-133111220) |
|
334-641, gnl|rn3|chr19 (26594732-26594968) |
|
334-641, gnl|tetNig1|chr18 (6610630-6610860) |
|
334-641, gnl|xenTro1|scaffold_429 (767264-767497) |
