Ss1.1-Pig2-39L20.5
|
GCGGCTCGAGTAGGGACGCAGGGGTCCATTTTATCGTTGTTCCTGCTTCTCTGTGTGTTT
GAAACATGCGACTTTCTTTTCTCATTAAGAGCTGAATAACGAGCACTCGTTCCCTCAAAT
CCTTTGAAGGCAGGGGTCCGGAGTGCCCGGCGACCCAAGGAAAGGGAAAGGGCACCTCCA
GTCTCAGTAACTATCTTCTGTTCCTCTTCTTAAGCATGTTCCTGGCTGATATAATTGAGA
AATATTTTGTTTCCCCAACCCTTTTCCGAGTCATCCGATTGGCCCGCATTGGGCGCATCT
TGCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCTGCTCTTTGCCTTAATGATGTCCT
TGCCGGCTCTGTTCAACATCGGCCTCCTGCTCTTCCTGGTCATGTTCATCTTCTCCATCT
TTGGGATGTCCAACTTCGCGTACGTGAAGCACGATGCCGGCATCGATGACATGTTCAACT
TCGAGACGTTCGGCAACAGCATGATCTGCCTGTTCCAGATCACCACCTCGGCTGGCTGGG
ACGGCCTGCTGCTGCCCATCCTCAACCGGCCCCCCGACTGCAGCCTGGACAAGGAGCACC
CGGGCAGTGGCTTTAAAGGCGACTGCGGGAACCCCTCCGTGGGCATCTTCTTCTTCGTGA
GCTACATCATCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGGCTCGAGTAGGGACGCAGGGGTCCATTTTATCGTTGTTCCTGCTTCTCTGTGTGTTT
GAAACATGCGACTTTCTTTTCTCATTAAGAGCTGAATAACGAGCACTCGTTCCCTCAAAT
CCTTTGAAGGCAGGGGTCCGGAGTGCCCGGCGACCCAAGGAAAGGGAAAGGGCACCTCCA
GTCTCAGTAACTATCTTCTGTTCCTCTTCTTAAGCATGTTCCTGGCTGATATAATTGAGA
AATATTTTGTTTCCCCAACCCTTTTCCGAGTCATCCGATTGGCCCGCATTGGGCGCATCT
TGCGTCTGATCAAAGGCGCCAAAGGGATTCGTACCCTGCTCTTTGCCTTAATGATGTCCT
TGCCGGCTCTGTTCAACATCGGCCTCCTGCTCTTCCTGGTCATGTTCATCTTCTCCATCT
TTGGGATGTCCAACTTCGCGTACGTGAAGCACGATGCCGGCATCGATGACATGTTCAACT
TCGAGACGTTCGGCAACAGCATGATCTGCCTGTTCCAGATCACCACCTCGGCTGGCTGGG
ACGGCCTGCTGCTGCCCATCCTCAACCGGCCCCCCGACTGCAGCCTGGACAAGGAGCACC
CGGGCAGTGGCTTTAAAGGCGACTGCGGGAACCCCTCCGTGGGCATCTTCTTCTTCGTGA
GCTACATCATCA
|
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gi|2895069|gb|AAC02900.1| |
Protein identifier
|
gi|2895069|gb|AAC02900.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
238-672, gnl|bosTau2|chr19 (40566979-40566542) |
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238-672, gnl|canFam2|chr9 (14977737-14978277) |
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238-672, gnl|danRer3|chr12 (2082542-2083082) |
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238-672, gnl|dasNov1|scaffold_4631 (44767-45307) |
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238-672, gnl|echTel1|scaffold_323535 (37017-36474) |
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238-672, gnl|fr1|chrUn (50136356-50135816) |
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238-672, gnl|galGal2|chrUn (6149444-6149981) |
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238-672, gnl|hg17|chr17 (59372513-59373053) |
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238-672, gnl|Hg17|chr17 (59373061-59372624) |
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238-672, gnl|loxAfr1|scaffold_35896 (4251-3711) |
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238-672, gnl|mm7|chr11 (106429388-106429928) |
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238-672, gnl|Mm7|chr11 (106429936-106429499) |
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238-672, gnl|monDom2|scaffold_18 (35584934-35584394) |
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238-672, gnl|oryCun1|scaffold_154545 (25008-24471) |
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238-672, gnl|panTro1|chr19 (45773584-45773039) |
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238-672, gnl|rheMac2|chr16 (59496727-59497267) |
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238-672, gnl|rn3|chr10 (95726750-95727290) |
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238-672, gnl|tetNig1|chr3 (3119571-3120111) |
|
238-672, gnl|xenTro1|scaffold_58 (731037-730497) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
238-672, gnl|bosTau2|chr19 (40566979-40566542) |
|
238-672, gnl|canFam2|chr9 (14977737-14978277) |
|
238-672, gnl|danRer3|chr12 (2082542-2083082) |
|
238-672, gnl|dasNov1|scaffold_4631 (44767-45307) |
|
238-672, gnl|echTel1|scaffold_323535 (37017-36474) |
|
238-672, gnl|fr1|chrUn (50136356-50135816) |
|
238-672, gnl|galGal2|chrUn (6149444-6149981) |
|
238-672, gnl|hg17|chr17 (59372513-59373053) |
|
238-672, gnl|Hg17|chr17 (59373061-59372624) |
|
238-672, gnl|loxAfr1|scaffold_35896 (4251-3711) |
|
238-672, gnl|mm7|chr11 (106429388-106429928) |
|
238-672, gnl|Mm7|chr11 (106429936-106429499) |
|
238-672, gnl|monDom2|scaffold_18 (35584934-35584394) |
|
238-672, gnl|oryCun1|scaffold_154545 (25008-24471) |
|
238-672, gnl|panTro1|chr19 (45773584-45773039) |
|
238-672, gnl|rheMac2|chr16 (59496727-59497267) |
|
238-672, gnl|rn3|chr10 (95726750-95727290) |
|
238-672, gnl|tetNig1|chr3 (3119571-3120111) |
|
238-672, gnl|xenTro1|scaffold_58 (731037-730497) |
