Non-Coding RNA Search

Ss1.1-Pig2-40M03.5

Sequence:


               
               GCTCTTTCTGTGATGTCCCAGCAAGTAGGCGGTCAAGTTCAAGTGGCCAGCGAACCTCTC
GCAGTTGGGATTCCACCAGGCTTGGTGTGGGGACCCTGGGGAGGTTCCTTTCTGGCACGT
GGGGGACCCCGGGGCCAGGCCAGCTTGAGGGGAGAGGGGGCGCTCTCACGAGCGGCCTCA
GGCGCTGTGGCCTCAGGCAGGCAGCCGGCTCCTCACAGGTGAATGAGGTCGTCTTCAGCC
CCGGCGGGTCCCGCTGTGCCACGTGCAGCAATGACGGGAGCTTGAGGGTGTGGTCCTTGG
CCAGCATGGAGCTCCTCATCCAGTTCCAGGTGCTAAGCCAGAGCTGCCTCTGCCTGGCTT
GGAGCCCCCCGTCCTGTGGACGCCCCGAGCAGCAGCAGGTGGCAGCAGGCTATGGTGACG
GCACGCTGCGAGTCTTCAGCGTCTCCCGGATGGCGATGGAGCTCAAAATGCACCCCCACC
CCGCCGCGGTGACAGCCGTCGTCTTCTCTGCTGACGGTCAGACTCTTCTGTCTGGAGACA
AAGAAGGGCTCGTGGCCGTGAGTCGCCCTCGCACAGGTGTGACCCTCCGCGTCCTGAGAG
ACCACCGAGGGGCCCCGATCTGCACCATCCAGAGCACGAGAAAAGAGTATGGAGACTTCG
GGGCAGAGGGTGCAGACCTGTGGCTGGCTGCCAGCGGGGACCAGCGGGTCAGCGTCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTTTCTGTGATGTCCCAGCAAGTAGGCGGTCAAGTTCAAGTGGCCAGCGAACCTCTC
GCAGTTGGGATTCCACCAGGCTTGGTGTGGGGACCCTGGGGAGGTTCCTTTCTGGCACGT
GGGGGACCCCGGGGCCAGGCCAGCTTGAGGGGAGAGGGGGCGCTCTCACGAGCGGCCTCA
GGCGCTGTGGCCTCAGGCAGGCAGCCGGCTCCTCACAGGTGAATGAGGTCGTCTTCAGCC
CCGGCGGGTCCCGCTGTGCCACGTGCAGCAATGACGGGAGCTTGAGGGTGTGGTCCTTGG
CCAGCATGGAGCTCCTCATCCAGTTCCAGGTGCTAAGCCAGAGCTGCCTCTGCCTGGCTT
GGAGCCCCCCGTCCTGTGGACGCCCCGAGCAGCAGCAGGTGGCAGCAGGCTATGGTGACG
GCACGCTGCGAGTCTTCAGCGTCTCCCGGATGGCGATGGAGCTCAAAATGCACCCCCACC
CCGCCGCGGTGACAGCCGTCGTCTTCTCTGCTGACGGTCAGACTCTTCTGTCTGGAGACA
AAGAAGGGCTCGTGGCCGTGAGTCGCCCTCGCACAGGTGTGACCCTCCGCGTCCTGAGAG
ACCACCGAGGGGCCCCGATCTGCACCATCCAGAGCACGAGAAAAGAGTATGGAGACTTCG
GGGCAGAGGGTGCAGACCTGTGGCTGGCTGCCAGCGGGGACCAGCGGGTCAGCGTCTGGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37574046|ref|NP_660337.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37574046|ref|NP_660337.2|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               189-370, gnl|bosTau2|chr25 (1243558-1243380)
               

               
               189-370, gnl|Hg17|chr16 (655644-655818)
               

               
               189-370, gnl|Mm7|chr17 (24029899-24029746)
               


               
               489-647, gnl|bosTau2|chr25 (1242966-1242808)
               

               
               489-647, gnl|Hg17|chr16 (656202-656351)
               

               
               489-647, gnl|Mm7|chr17 (24029397-24029239)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               189-370, gnl|bosTau2|chr25 (1243558-1243380)
               

               
               189-370, gnl|Hg17|chr16 (655644-655818)
               

               
               189-370, gnl|Mm7|chr17 (24029899-24029746)
               


               
               489-647, gnl|bosTau2|chr25 (1242966-1242808)
               

               
               489-647, gnl|Hg17|chr16 (656202-656351)
               

               
               489-647, gnl|Mm7|chr17 (24029397-24029239)

	189-370, gnl\|bosTau2\|chr25 (1243558-1243380)
	189-370, gnl\|Hg17\|chr16 (655644-655818)
	189-370, gnl\|Mm7\|chr17 (24029899-24029746)

	489-647, gnl\|bosTau2\|chr25 (1242966-1242808)
	489-647, gnl\|Hg17\|chr16 (656202-656351)
	489-647, gnl\|Mm7\|chr17 (24029397-24029239)