Ss1.1-Pig2-44D04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTGGTAGCGCAGCACGTAGACGGAGCGGTGGACATGGTAGGGCACGAAGCACCCCAGGA AGATGGCCAGCACAGCTGCGATCATGCGCACTGCCTTGTTCTTGAGGCGCCGCTCCACAC GGGGGCCCTGCCGCAGGCTGCGGATGATCAGCAGGTAGCAGGTGACCGTGGTGACGAACG GGAAGGTGAAAGCCACGGCCAGGGATGCAAGGGCGTGCTGGGAGGCCTTCTCCCGGTACA GCTGCAGGCAGATGACCGTGTGGTTGGTCTGCACGGTCTGTGGGCTCACCAGCAGTGGGG CCATGGCCACGGCCACCACCACCCAGAGGAAGGCGCAGGCCAGGTGGGCGTGGAGGGGCC TGCGGAGCTTGAGCGACTTGACAGGGTGTACGATGGCCAGGAAGCGGTCAGCGCTGATGC AGGTGAGGAAGTAGATGCTGGCGTACATGTTGAGGTAGAAGAGGAAGCCGGTGAGCCGGC ACGGGATCTCCCCGAATGGCCAGTGGTTCCCTGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTGGTAGCGCAGCACGTAGACGGAGCGGTGGACATGGTAGGGCACGAAGCACCCCAGGA AGATGGCCAGCACAGCTGCGATCATGCGCACTGCCTTGTTCTTGAGGCGCCGCTCCACAC GGGGGCCCTGCCGCAGGCTGCGGATGATCAGCAGGTAGCAGGTGACCGTGGTGACGAACG GGAAGGTGAAAGCCACGGCCAGGGATGCAAGGGCGTGCTGGGAGGCCTTCTCCCGGTACA GCTGCAGGCAGATGACCGTGTGGTTGGTCTGCACGGTCTGTGGGCTCACCAGCAGTGGGG CCATGGCCACGGCCACCACCACCCAGAGGAAGGCGCAGGCCAGGTGGGCGTGGAGGGGCC TGCGGAGCTTGAGCGACTTGACAGGGTGTACGATGGCCAGGAAGCGGTCAGCGCTGATGC AGGTGAGGAAGTAGATGCTGGCGTACATGTTGAGGTAGAAGAGGAAGCCGGTGAGCCGGC ACGGGATCTCCCCGAATGGCCAGTGGTTCCCTGAGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 160-279, + strand, RNAz p=0.972505 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 160-279, + strand, RNAz p=0.972505 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-516, gnl|bosTau2|chr2 (3642909-3643424) | |
| 1-516, gnl|canFam2|chr19 (25980873-25980134) | |
| 1-516, gnl|danRer3|chr6 (12381234-12380495) | |
| 1-516, gnl|dasNov1|scaffold_50609 (4730-5496) | |
| 1-516, gnl|echTel1|scaffold_179703 (6570-7308) | |
| 1-516, gnl|fr1|chrUn (43417384-43418123) | |
| 1-516, gnl|galGal2|chr9 (816497-817236) | |
| 1-516, gnl|hg17|chr2 (128124717-128125456) | |
| 1-516, gnl|Hg17|chr2 (128125329-128124814) | |
| 1-516, gnl|loxAfr1|scaffold_97402 (3351-4135) | |
| 1-516, gnl|mm7|chr18 (32339911-32339172) | |
| 1-516, gnl|Mm7|chr18 (32339297-32339812) | |
| 1-516, gnl|monDom2|scaffold_24 (43258397-43257658) | |
| 1-516, gnl|oryCun1|scaffold_209722 (53150-53889) | |
| 1-516, gnl|panTro1|chr13 (14247097-14247836) | |
| 1-516, gnl|rheMac2|chr13 (134111203-134111942) | |
| 1-516, gnl|rn3|chr18 (24401743-24401004) | |
| 1-516, gnl|tetNig1|chr1_random (735813-736552) | |
| 1-516, gnl|xenTro1|scaffold_209 (1373255-1372513) | |
| 271-507, gnl|bosTau2|chr15 (51921480-51921722) | |
| 271-507, gnl|canFam2|chr18 (41944683-41943889) | |
| 271-507, gnl|danRer3|chr14 (50401552-50402356) | |
| 271-507, gnl|dasNov1|scaffold_130449 (4589-5371) | |
| 271-507, gnl|echTel1|scaffold_268027 (7339-6545) | |
| 271-507, gnl|fr1|chrUn (295971057-295971861) | |
| 271-507, gnl|galGal2|chrUn (57379637-57380438) | |
| 271-507, gnl|hg17|chr11 (56760090-56760884) | |
| 271-507, gnl|Hg17|chr11 (56760537-56760777) | |
| 271-507, gnl|loxAfr1|scaffold_97402 (4149-3355) | |
| 271-507, gnl|mm7|chr2 (84981309-84980515) | |
| 271-507, gnl|Mm7|chr2 (84980858-84980620) | |
| 271-507, gnl|monDom2|scaffold_33 (20291941-20292735) | |
| 271-507, gnl|oryCun1|scaffold_205513 (107638-106844) | |
| 271-507, gnl|panTro1|chr9 (57668109-57668903) | |
| 271-507, gnl|rheMac2|chr14 (16181912-16181118) | |
| 271-507, gnl|rn3|chr3 (68263192-68262398) | |
| 271-507, gnl|tetNig1|chr4 (1480340-1481144) | |
| 271-507, gnl|xenTro1|scaffold_135 (925195-924439) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-516, gnl|bosTau2|chr2 (3642909-3643424) | |
| 1-516, gnl|canFam2|chr19 (25980873-25980134) | |
| 1-516, gnl|danRer3|chr6 (12381234-12380495) | |
| 1-516, gnl|dasNov1|scaffold_50609 (4730-5496) | |
| 1-516, gnl|echTel1|scaffold_179703 (6570-7308) | |
| 1-516, gnl|fr1|chrUn (43417384-43418123) | |
| 1-516, gnl|galGal2|chr9 (816497-817236) | |
| 1-516, gnl|hg17|chr2 (128124717-128125456) | |
| 1-516, gnl|Hg17|chr2 (128125329-128124814) | |
| 1-516, gnl|loxAfr1|scaffold_97402 (3351-4135) | |
| 1-516, gnl|mm7|chr18 (32339911-32339172) | |
| 1-516, gnl|Mm7|chr18 (32339297-32339812) | |
| 1-516, gnl|monDom2|scaffold_24 (43258397-43257658) | |
| 1-516, gnl|oryCun1|scaffold_209722 (53150-53889) | |
| 1-516, gnl|panTro1|chr13 (14247097-14247836) | |
| 1-516, gnl|rheMac2|chr13 (134111203-134111942) | |
| 1-516, gnl|rn3|chr18 (24401743-24401004) | |
| 1-516, gnl|tetNig1|chr1_random (735813-736552) | |
| 1-516, gnl|xenTro1|scaffold_209 (1373255-1372513) | |
| 271-507, gnl|bosTau2|chr15 (51921480-51921722) | |
| 271-507, gnl|canFam2|chr18 (41944683-41943889) | |
| 271-507, gnl|danRer3|chr14 (50401552-50402356) | |
| 271-507, gnl|dasNov1|scaffold_130449 (4589-5371) | |
| 271-507, gnl|echTel1|scaffold_268027 (7339-6545) | |
| 271-507, gnl|fr1|chrUn (295971057-295971861) | |
| 271-507, gnl|galGal2|chrUn (57379637-57380438) | |
| 271-507, gnl|hg17|chr11 (56760090-56760884) | |
| 271-507, gnl|Hg17|chr11 (56760537-56760777) | |
| 271-507, gnl|loxAfr1|scaffold_97402 (4149-3355) | |
| 271-507, gnl|mm7|chr2 (84981309-84980515) | |
| 271-507, gnl|Mm7|chr2 (84980858-84980620) | |
| 271-507, gnl|monDom2|scaffold_33 (20291941-20292735) | |
| 271-507, gnl|oryCun1|scaffold_205513 (107638-106844) | |
| 271-507, gnl|panTro1|chr9 (57668109-57668903) | |
| 271-507, gnl|rheMac2|chr14 (16181912-16181118) | |
| 271-507, gnl|rn3|chr3 (68263192-68262398) | |
| 271-507, gnl|tetNig1|chr4 (1480340-1481144) | |
| 271-507, gnl|xenTro1|scaffold_135 (925195-924439) |