Ss1.1-Pig2-44D23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGTGGTGGACGGTGACGTCGTCCCGGATGACCCCGAGATCCTCATGCAGCAGGGAGAAT TTCTCAACTACGACATGCTCATCGGGGTTAACCAAGGAGAGGGCCTCAAGTTCGTGGAGG ACTCGGCGGAGAGCGAGGACGGCGTGTCTGCCAGCGCCTTCGACTTCACCGTCTCCAACT TTGTGGACAACCTGTATGGCTACCCCGAGGGCAAGGACGTGCTGCGGGAGACCATCAAGT TTATGTACACGGACTGGGCCGACAGGGACAATGGCGAGATGCGGCGCAAGACCCTGCTGG CGCTCTTTACCGACCACCAGTGGGTGGCACCGGCTGTGGCCACCGCCAAGCTGCACGCCG ACTACCAGTCCCCCGTCTACTTTTACACCTTCTACCACCACTGCCAGGCCGAGGGCCGGC CCGAGTGGGCAGACGCAGCGCACGGGGACGAGCTACCCTACGTCTTCGGGGTGCCCATGG TGGGCGCCACCGACCTCTTCCCCTGCAACTTCTCCAAGAATGACGTCATGCTCAGCGCTG TGGTCATGACCTACTGGACCAACTTCGCCAAGACTGGCGACCCCAACCAGCCGGTGCCGC AGGACACCAAGTTCATCCACACCAAGCCCAACCGCTTTGAGGAGGTGGTGTGGAGCAAGT TCAACAGCAAGGAGAAGCAGTACCTGCACATTGGCTTGAAGCCGCGCGTGCGCGACAACT ACCGCGCCAACAAGGTGGCCTTCTGGCTGGAGCTCGTGCCGCACCTGCACAACCTGCACA CGGAGCTCTTCACCACCACCACGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGTGGTGGACGGTGACGTCGTCCCGGATGACCCCGAGATCCTCATGCAGCAGGGAGAAT TTCTCAACTACGACATGCTCATCGGGGTTAACCAAGGAGAGGGCCTCAAGTTCGTGGAGG ACTCGGCGGAGAGCGAGGACGGCGTGTCTGCCAGCGCCTTCGACTTCACCGTCTCCAACT TTGTGGACAACCTGTATGGCTACCCCGAGGGCAAGGACGTGCTGCGGGAGACCATCAAGT TTATGTACACGGACTGGGCCGACAGGGACAATGGCGAGATGCGGCGCAAGACCCTGCTGG CGCTCTTTACCGACCACCAGTGGGTGGCACCGGCTGTGGCCACCGCCAAGCTGCACGCCG ACTACCAGTCCCCCGTCTACTTTTACACCTTCTACCACCACTGCCAGGCCGAGGGCCGGC CCGAGTGGGCAGACGCAGCGCACGGGGACGAGCTACCCTACGTCTTCGGGGTGCCCATGG TGGGCGCCACCGACCTCTTCCCCTGCAACTTCTCCAAGAATGACGTCATGCTCAGCGCTG TGGTCATGACCTACTGGACCAACTTCGCCAAGACTGGCGACCCCAACCAGCCGGTGCCGC AGGACACCAAGTTCATCCACACCAAGCCCAACCGCTTTGAGGAGGTGGTGTGGAGCAAGT TCAACAGCAAGGAGAAGCAGTACCTGCACATTGGCTTGAAGCCGCGCGTGCGCGACAACT ACCGCGCCAACAAGGTGGCCTTCTGGCTGGAGCTCGTGCCGCACCTGCACAACCTGCACA CGGAGCTCTTCACCACCACCACGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 282-401, - strand, RNAz p=0.838719 | |
| 579-737, - strand, RNAz p=0.603614 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 282-401, - strand, RNAz p=0.838719 | |
| 579-737, - strand, RNAz p=0.603614 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-577, gnl|bosTau2|chrX (21952145-21952719) | |
| 3-577, gnl|Hg17|chrX (70170097-70170671) | |
| 3-577, gnl|Mm7|chrX (96645499-96646073) | |
| 579-779, gnl|bosTau2|chrX (21953358-21953558) | |
| 579-779, gnl|canFam2|chrX (58456765-58456995) | |
| 579-779, gnl|danRer3|chr5 (16059845-16060075) | |
| 579-779, gnl|dasNov1|scaffold_5305 (35988-35758) | |
| 579-779, gnl|echTel1|scaffold_311338 (44103-43874) | |
| 579-779, gnl|fr1|chrUn (49762044-49761813) | |
| 579-779, gnl|galGal2|chr4 (2152058-2151828) | |
| 579-779, gnl|hg17|chrX (70172117-70172347) | |
| 579-779, gnl|Hg17|chrX (70172126-70172326) | |
| 579-779, gnl|loxAfr1|scaffold_17570 (5481-5711) | |
| 579-779, gnl|mm7|chrX (96646766-96646996) | |
| 579-779, gnl|Mm7|chrX (96646775-96646975) | |
| 579-779, gnl|monDom2|scaffold_188 (7888-8118) | |
| 579-779, gnl|oryCun1|scaffold_176291 (15451-15221) | |
| 579-779, gnl|panTro1|chrX (72370113-72370343) | |
| 579-779, gnl|rheMac2|chr16 (7145368-7145583) | |
| 579-779, gnl|rn3|chrX (89470929-89471159) | |
| 579-779, gnl|tetNig1|chr7 (5260150-5259926) | |
| 579-779, gnl|xenTro1|scaffold_482 (374109-374336) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-577, gnl|bosTau2|chrX (21952145-21952719) | |
| 3-577, gnl|Hg17|chrX (70170097-70170671) | |
| 3-577, gnl|Mm7|chrX (96645499-96646073) | |
| 579-779, gnl|bosTau2|chrX (21953358-21953558) | |
| 579-779, gnl|canFam2|chrX (58456765-58456995) | |
| 579-779, gnl|danRer3|chr5 (16059845-16060075) | |
| 579-779, gnl|dasNov1|scaffold_5305 (35988-35758) | |
| 579-779, gnl|echTel1|scaffold_311338 (44103-43874) | |
| 579-779, gnl|fr1|chrUn (49762044-49761813) | |
| 579-779, gnl|galGal2|chr4 (2152058-2151828) | |
| 579-779, gnl|hg17|chrX (70172117-70172347) | |
| 579-779, gnl|Hg17|chrX (70172126-70172326) | |
| 579-779, gnl|loxAfr1|scaffold_17570 (5481-5711) | |
| 579-779, gnl|mm7|chrX (96646766-96646996) | |
| 579-779, gnl|Mm7|chrX (96646775-96646975) | |
| 579-779, gnl|monDom2|scaffold_188 (7888-8118) | |
| 579-779, gnl|oryCun1|scaffold_176291 (15451-15221) | |
| 579-779, gnl|panTro1|chrX (72370113-72370343) | |
| 579-779, gnl|rheMac2|chr16 (7145368-7145583) | |
| 579-779, gnl|rn3|chrX (89470929-89471159) | |
| 579-779, gnl|tetNig1|chr7 (5260150-5259926) | |
| 579-779, gnl|xenTro1|scaffold_482 (374109-374336) |