Ss1.1-Pig2-44J06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGCGCTAGGAGCAGCGAGTCGGACGGGACTGTTCTTGCGCCCTCCGACCCGCGCCCGCC GGCTCCTCGCCCTTGTGCAGCGCACCAACCCGCGGCCGGATTGGGGATGCGCACCCCGCC GGCTTCCGGGGACCAGGGCAGCGAGGTGCCAGACCCCACCTTTGCTGATGGCGAGCTCCT CCCCAGGGAGCCTGGCTTCTTTCCCGAGGACGAGGACGAGGACGAGGCTATGACGCTGGC CCCGCCCGAGGGTCCCCAGGAGTTGGACATGGAGGGCCCCATGGAGAGCACCCGGAGCCT GGACGGGTCCCTCGGGATGCCCGCCGAGAAGGACGCAGGGCTCGGGAGCCTGTTCCTGCC GGAGGACAAGTCCCGGGTCCACACTCCACCCATGACCACGTCGGACCTCTCCACGCACTC CACCACCTCGCTGGTCAGCAACGAGGAGCAGTTCGAAGACTACGGGGAGGCGGATGATGT GGACTGTGCCCCGAGCAGCCCCTGCCCCGACGACGAGACCAGGACCAACGTCTACTCGGA CCTGGGGTCGTCCGTGTCCTCCAGCGCGGGGCAGACGCCTAGGAAGGAGCGGCACGCGTA CAACAGCGAGTTGCTGGATGTTTACTGCTCTCAGTGCTGCAAGAAGATCAACCTGCTCAA TGACCTGGAAGCCCGGCTGAAAAACCTCAAGGCCAATAGCCCCAACCGAAAGATCTCTAG CACGGCCTTCGGACGGCAGCTCATGCAAAGCAGCAACTTCAGTAGCAGCAATGGCAGCAC CGAGGACCTGTTTCGGGACAGCATCGACTCCTGCGACAACGACATCACAGAGAAGGTGAG CTTCCTGGAAAAGAAGGTGACAGAGCTGGAAAATGACATCCTGACCAACGGGGACCTGAA GAGCAAGCTGAAGCAGGAGAACACGCAGCTGGTGCACAGGGTGCACGAGCTGGAGGAGAT GGTGAAGGACCAGGAGGCCACGGCCGAGCAGGCCCTGGAAGAGGAGGTGCGGCGCCACCG TGAGGCCTACGGCAGGCTGGAGCGGGAACGGGGCACGGAGATCGAGCTGCTCAACACCAG GGTGCAGAAGTTAGAGGAAGAAAATGCCGAGCTCAGAACGACAGTGACTCGGCTTAAGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGCGCTAGGAGCAGCGAGTCGGACGGGACTGTTCTTGCGCCCTCCGACCCGCGCCCGCC GGCTCCTCGCCCTTGTGCAGCGCACCAACCCGCGGCCGGATTGGGGATGCGCACCCCGCC GGCTTCCGGGGACCAGGGCAGCGAGGTGCCAGACCCCACCTTTGCTGATGGCGAGCTCCT CCCCAGGGAGCCTGGCTTCTTTCCCGAGGACGAGGACGAGGACGAGGCTATGACGCTGGC CCCGCCCGAGGGTCCCCAGGAGTTGGACATGGAGGGCCCCATGGAGAGCACCCGGAGCCT GGACGGGTCCCTCGGGATGCCCGCCGAGAAGGACGCAGGGCTCGGGAGCCTGTTCCTGCC GGAGGACAAGTCCCGGGTCCACACTCCACCCATGACCACGTCGGACCTCTCCACGCACTC CACCACCTCGCTGGTCAGCAACGAGGAGCAGTTCGAAGACTACGGGGAGGCGGATGATGT GGACTGTGCCCCGAGCAGCCCCTGCCCCGACGACGAGACCAGGACCAACGTCTACTCGGA CCTGGGGTCGTCCGTGTCCTCCAGCGCGGGGCAGACGCCTAGGAAGGAGCGGCACGCGTA CAACAGCGAGTTGCTGGATGTTTACTGCTCTCAGTGCTGCAAGAAGATCAACCTGCTCAA TGACCTGGAAGCCCGGCTGAAAAACCTCAAGGCCAATAGCCCCAACCGAAAGATCTCTAG CACGGCCTTCGGACGGCAGCTCATGCAAAGCAGCAACTTCAGTAGCAGCAATGGCAGCAC CGAGGACCTGTTTCGGGACAGCATCGACTCCTGCGACAACGACATCACAGAGAAGGTGAG CTTCCTGGAAAAGAAGGTGACAGAGCTGGAAAATGACATCCTGACCAACGGGGACCTGAA GAGCAAGCTGAAGCAGGAGAACACGCAGCTGGTGCACAGGGTGCACGAGCTGGAGGAGAT GGTGAAGGACCAGGAGGCCACGGCCGAGCAGGCCCTGGAAGAGGAGGTGCGGCGCCACCG TGAGGCCTACGGCAGGCTGGAGCGGGAACGGGGCACGGAGATCGAGCTGCTCAACACCAG GGTGCAGAAGTTAGAGGAAGAAAATGCCGAGCTCAGAACGACAGTGACTCGGCTTAAGTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 197-316, - strand, RNAz p=0.827868 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 197-316, - strand, RNAz p=0.827868 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 41-371, gnl|bosTau2|chr19 (10003851-10004174) | |
| 561-699, gnl|bosTau2|chr19 (10006578-10006716) | |
| 561-699, gnl|canFam2|chr9 (44676492-44676328) | |
| 561-699, gnl|danRer3|chr3 (29281287-29281427) | |
| 561-699, gnl|dasNov1|scaffold_116223 (2057-1898) | |
| 561-699, gnl|echTel1|scaffold_315576 (32470-32629) | |
| 561-699, gnl|fr1|chrUn (86703306-86703467) | |
| 561-699, gnl|galGal2|chr18 (6190635-6190788) | |
| 561-699, gnl|hg17|chr17 (26873037-26873199) | |
| 561-699, gnl|Hg17|chr17 (26873049-26873187) | |
| 561-699, gnl|mm7|chr11 (79765767-79765944) | |
| 561-699, gnl|Mm7|chr11 (79765794-79765932) | |
| 561-699, gnl|monDom2|scaffold_44 (12383247-12383091) | |
| 561-699, gnl|panTro1|chr19_random (13352425-13352587) | |
| 561-699, gnl|rheMac2|chr16 (26701671-26701833) | |
| 561-699, gnl|rn3|chr10 (65887458-65887633) | |
| 561-699, gnl|tetNig1|chrUn_random (53783875-53783718) | |
| 735-841, gnl|bosTau2|chr19 (10008635-10008741) | |
| 735-841, gnl|canFam2|chr9 (44674894-44674776) | |
| 735-841, gnl|danRer3|chr3 (29287644-29287753) | |
| 735-841, gnl|dasNov1|scaffold_116223 (878-761) | |
| 735-841, gnl|echTel1|scaffold_315576 (33718-33835) | |
| 735-841, gnl|fr1|chrUn (86704243-86704364) | |
| 735-841, gnl|galGal2|chr18 (6193148-6193265) | |
| 735-841, gnl|hg17|chr17 (26874639-26874756) | |
| 735-841, gnl|Hg17|chr17 (26874649-26874755) | |
| 735-841, gnl|mm7|chr11 (79766593-79766709) | |
| 735-841, gnl|Mm7|chr11 (79766602-79766708) | |
| 735-841, gnl|monDom2|scaffold_44 (12378859-12378751) | |
| 735-841, gnl|oryCun1|scaffold_94193 (15174-15294) | |
| 735-841, gnl|panTro1|chr19_random (13354028-13354145) | |
| 735-841, gnl|rheMac2|chr16 (26703249-26703366) | |
| 735-841, gnl|rn3|chr10 (65888358-65888472) | |
| 735-841, gnl|tetNig1|chrUn_random (53782452-53782350) | |
| 922-1081, gnl|bosTau2|chr19 (10010111-10010269) | |
| 922-1081, gnl|Hg17|chr17 (26876221-26876369) | |
| 922-1081, gnl|Mm7|chr11 (79768110-79768268) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-371, gnl|bosTau2|chr19 (10003851-10004174) | |
| 561-699, gnl|bosTau2|chr19 (10006578-10006716) | |
| 561-699, gnl|canFam2|chr9 (44676492-44676328) | |
| 561-699, gnl|danRer3|chr3 (29281287-29281427) | |
| 561-699, gnl|dasNov1|scaffold_116223 (2057-1898) | |
| 561-699, gnl|echTel1|scaffold_315576 (32470-32629) | |
| 561-699, gnl|fr1|chrUn (86703306-86703467) | |
| 561-699, gnl|galGal2|chr18 (6190635-6190788) | |
| 561-699, gnl|hg17|chr17 (26873037-26873199) | |
| 561-699, gnl|Hg17|chr17 (26873049-26873187) | |
| 561-699, gnl|mm7|chr11 (79765767-79765944) | |
| 561-699, gnl|Mm7|chr11 (79765794-79765932) | |
| 561-699, gnl|monDom2|scaffold_44 (12383247-12383091) | |
| 561-699, gnl|panTro1|chr19_random (13352425-13352587) | |
| 561-699, gnl|rheMac2|chr16 (26701671-26701833) | |
| 561-699, gnl|rn3|chr10 (65887458-65887633) | |
| 561-699, gnl|tetNig1|chrUn_random (53783875-53783718) | |
| 735-841, gnl|bosTau2|chr19 (10008635-10008741) | |
| 735-841, gnl|canFam2|chr9 (44674894-44674776) | |
| 735-841, gnl|danRer3|chr3 (29287644-29287753) | |
| 735-841, gnl|dasNov1|scaffold_116223 (878-761) | |
| 735-841, gnl|echTel1|scaffold_315576 (33718-33835) | |
| 735-841, gnl|fr1|chrUn (86704243-86704364) | |
| 735-841, gnl|galGal2|chr18 (6193148-6193265) | |
| 735-841, gnl|hg17|chr17 (26874639-26874756) | |
| 735-841, gnl|Hg17|chr17 (26874649-26874755) | |
| 735-841, gnl|mm7|chr11 (79766593-79766709) | |
| 735-841, gnl|Mm7|chr11 (79766602-79766708) | |
| 735-841, gnl|monDom2|scaffold_44 (12378859-12378751) | |
| 735-841, gnl|oryCun1|scaffold_94193 (15174-15294) | |
| 735-841, gnl|panTro1|chr19_random (13354028-13354145) | |
| 735-841, gnl|rheMac2|chr16 (26703249-26703366) | |
| 735-841, gnl|rn3|chr10 (65888358-65888472) | |
| 735-841, gnl|tetNig1|chrUn_random (53782452-53782350) | |
| 922-1081, gnl|bosTau2|chr19 (10010111-10010269) | |
| 922-1081, gnl|Hg17|chr17 (26876221-26876369) | |
| 922-1081, gnl|Mm7|chr11 (79768110-79768268) |