Ss1.1-Pig2-45B23.5
|
TGCTCTTCATCAGCACAGTTATCATCCTTCAGGAAGCAAACCTAAGAATCAACAGACTTC
TTTCCAATCCTCTGCTTCTAATAAATCACTCAAGAGCCATGGCCTTCAGAATCACCCTTG
GCAGAAATTGAAGAGTGAAAAGCAGCACATCAGAGTTAAGAGAGCACAGAGTCTCATTGA
CCAGACCTCAGAAGCAGCTGGGTTAGAAAGCGTGGCCAAGTCCGAGAGTGGGACCAACCT
CAGAGAGCACAGCCCGTCTGAGAGTGAGAAGGAAATTGTCGGTGCAGACCCCAGAGGAGC
AAAACCCAAAAAAGCAACCCAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGG
GAAGCTCAAAAGTGAGTGGGGTAACAGATTGACTCCAAAACCTGAGGATGCAGGATCTGA
AAACACCAAACCTGTGGGGGTTATCCAGCCTGATTCTTCGGATACATCCTCTAGAAAAGG
AATAGTGGATGGCTCTGGGGCCAGACGCAGCGAGCAGAAAAGATACCTACAGAAGAGGCC
TCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGGAATCCACCAAAACAGGAGGG
CCAACGACATACAAACATAGGATTCAGAAACAACACGGCCTCCATTCCAAAAGATAATCT
TAATGAAAGACCAGCAAAATCTGCCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTC
TTTCAGAAGGGTTGACCTAGAGAAATGTGCCGTAAGGAGGCAGGATCCTCAGGTAACATC
TTTCCCCCGAGGCAAACAGAACCACCTGCTGAAGAATGTGGAAACACACACAGGTTCTCT
AATTGAACAGCTGACTACAGAAAAATATGAGTGCATGGTGTGCTGTGAATTGGTTCGTGT
CACAGCCCCTGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTCTTCATCAGCACAGTTATCATCCTTCAGGAAGCAAACCTAAGAATCAACAGACTTC
TTTCCAATCCTCTGCTTCTAATAAATCACTCAAGAGCCATGGCCTTCAGAATCACCCTTG
GCAGAAATTGAAGAGTGAAAAGCAGCACATCAGAGTTAAGAGAGCACAGAGTCTCATTGA
CCAGACCTCAGAAGCAGCTGGGTTAGAAAGCGTGGCCAAGTCCGAGAGTGGGACCAACCT
CAGAGAGCACAGCCCGTCTGAGAGTGAGAAGGAAATTGTCGGTGCAGACCCCAGAGGAGC
AAAACCCAAAAAAGCAACCCAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGG
GAAGCTCAAAAGTGAGTGGGGTAACAGATTGACTCCAAAACCTGAGGATGCAGGATCTGA
AAACACCAAACCTGTGGGGGTTATCCAGCCTGATTCTTCGGATACATCCTCTAGAAAAGG
AATAGTGGATGGCTCTGGGGCCAGACGCAGCGAGCAGAAAAGATACCTACAGAAGAGGCC
TCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGGAATCCACCAAAACAGGAGGG
CCAACGACATACAAACATAGGATTCAGAAACAACACGGCCTCCATTCCAAAAGATAATCT
TAATGAAAGACCAGCAAAATCTGCCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTC
TTTCAGAAGGGTTGACCTAGAGAAATGTGCCGTAAGGAGGCAGGATCCTCAGGTAACATC
TTTCCCCCGAGGCAAACAGAACCACCTGCTGAAGAATGTGGAAACACACACAGGTTCTCT
AATTGAACAGCTGACTACAGAAAAATATGAGTGCATGGTGTGCTGTGAATTGGTTCGTGT
CACAGCCCCTGT
|
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gi|61858820|ref|XP_617119.1| |
Protein identifier
|
gi|61858820|ref|XP_617119.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
69-835, gnl|bosTau2|chr8 (40393989-40394749) |
|
69-835, gnl|canFam2|chr11 (53422656-53423242) |
|
69-835, gnl|dasNov1|scaffold_5711 (893-304) |
|
69-835, gnl|echTel1|scaffold_174952 (898-1487) |
|
69-835, gnl|galGal2|chr2 (55219943-55220556) |
|
69-835, gnl|hg17|chr9 (33284710-33285299) |
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69-835, gnl|Hg17|chr9 (33284709-33285427) |
|
69-835, gnl|loxAfr1|scaffold_22624 (12481-11892) |
|
69-835, gnl|mm7|chr4 (41115099-41115679) |
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69-835, gnl|Mm7|chr4 (41114982-41115807) |
|
69-835, gnl|monDom2|scaffold_83 (5330970-5330375) |
|
69-835, gnl|oryCun1|scaffold_209829 (229652-230241) |
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69-835, gnl|panTro1|chr11 (33782900-33783489) |
|
69-835, gnl|rheMac2|chr15 (43933705-43933116) |
|
69-835, gnl|rn3|chr5 (58371870-58372450) |
|
69-835, gnl|xenTro1|scaffold_89 (1585982-1586578) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
69-835, gnl|bosTau2|chr8 (40393989-40394749) |
|
69-835, gnl|canFam2|chr11 (53422656-53423242) |
|
69-835, gnl|dasNov1|scaffold_5711 (893-304) |
|
69-835, gnl|echTel1|scaffold_174952 (898-1487) |
|
69-835, gnl|galGal2|chr2 (55219943-55220556) |
|
69-835, gnl|hg17|chr9 (33284710-33285299) |
|
69-835, gnl|Hg17|chr9 (33284709-33285427) |
|
69-835, gnl|loxAfr1|scaffold_22624 (12481-11892) |
|
69-835, gnl|mm7|chr4 (41115099-41115679) |
|
69-835, gnl|Mm7|chr4 (41114982-41115807) |
|
69-835, gnl|monDom2|scaffold_83 (5330970-5330375) |
|
69-835, gnl|oryCun1|scaffold_209829 (229652-230241) |
|
69-835, gnl|panTro1|chr11 (33782900-33783489) |
|
69-835, gnl|rheMac2|chr15 (43933705-43933116) |
|
69-835, gnl|rn3|chr5 (58371870-58372450) |
|
69-835, gnl|xenTro1|scaffold_89 (1585982-1586578) |
