Non-Coding RNA Search

Ss1.1-Pig2-46A04.5

Sequence:


               
               CCGGAGGGAGGGCGGCCGGGAGCCGGGGTACGGGGTGGGGCCCGCCGCCAGTCTCAGCCT
GGTCGCGGGGAGCAACATGAAGTGTTTGGTCACGGGCGGCAACGTGAAGGTGCTCGGCAA
GGCTGTCCACTCCCTGTCCCGTATCGGGGACGAACTCTACCTGGAGCCCCTGGAAGATGG
GCTCTCCCTCCGGACTGTGAACTCCTCCCGCTCCGCCTATGCCTGCTTCCTCTTTGCCCC
GCTCTTCTTCCAGCAGTACCAGGCGGCCACCCCTGGTCAGGACCCATTGCGCTGTAAGAT
CCTGATGAAGTCGTTCCTGTCCGTCTTCCGCTCACTGGCGATGCTGGAGAAGACGGTGGA
GAAGTGCTGCATCTCCCTGAGTGGCAGGAGCAGCCGCCTGGTGGTTCAGCTGCACTGCAG
ATATGGGGTGAGGAAGACTCACAACTTGTCCTTCCAGGACTGCGAGTCCCTGCAGGCCGT
CTTCGACCCAGCCTTGTGCCCCCACGTGCTCCGTGCTCCAGCAAGGGTCCTGGGGGAGGC
TGTTCTGCCCTTCCCCCCCGCGCTGGCTGAAGTGACGCTGGGCATTGGCCGTGGCCGCAG
GGTCATCCTGCGGAGCTACCAGGAGGAGGAGGCAGACAGCACCGCCAAAGCCATGGTGAC
TGAGATGAGCATCGGGGAGGAGGATTTCCAGCAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGAGGGAGGGCGGCCGGGAGCCGGGGTACGGGGTGGGGCCCGCCGCCAGTCTCAGCCT
GGTCGCGGGGAGCAACATGAAGTGTTTGGTCACGGGCGGCAACGTGAAGGTGCTCGGCAA
GGCTGTCCACTCCCTGTCCCGTATCGGGGACGAACTCTACCTGGAGCCCCTGGAAGATGG
GCTCTCCCTCCGGACTGTGAACTCCTCCCGCTCCGCCTATGCCTGCTTCCTCTTTGCCCC
GCTCTTCTTCCAGCAGTACCAGGCGGCCACCCCTGGTCAGGACCCATTGCGCTGTAAGAT
CCTGATGAAGTCGTTCCTGTCCGTCTTCCGCTCACTGGCGATGCTGGAGAAGACGGTGGA
GAAGTGCTGCATCTCCCTGAGTGGCAGGAGCAGCCGCCTGGTGGTTCAGCTGCACTGCAG
ATATGGGGTGAGGAAGACTCACAACTTGTCCTTCCAGGACTGCGAGTCCCTGCAGGCCGT
CTTCGACCCAGCCTTGTGCCCCCACGTGCTCCGTGCTCCAGCAAGGGTCCTGGGGGAGGC
TGTTCTGCCCTTCCCCCCCGCGCTGGCTGAAGTGACGCTGGGCATTGGCCGTGGCCGCAG
GGTCATCCTGCGGAGCTACCAGGAGGAGGAGGCAGACAGCACCGCCAAAGCCATGGTGAC
TGAGATGAGCATCGGGGAGGAGGATTTCCAGCAGTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61554406|gb|AAX46552.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61554406|gb|AAX46552.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               181-310, gnl|bosTau2|chr29 (39773816-39773687)
               

               
               181-310, gnl|Hg17|chr11 (66916700-66916829)
               

               
               181-310, gnl|Mm7|chr19 (4095864-4095735)
               


               
               507-635, gnl|bosTau2|chr29 (39771600-39771472)
               

               
               507-635, gnl|Hg17|chr11 (66919744-66919872)
               

               
               507-635, gnl|Mm7|chr19 (4092600-4092477)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               181-310, gnl|bosTau2|chr29 (39773816-39773687)
               

               
               181-310, gnl|Hg17|chr11 (66916700-66916829)
               

               
               181-310, gnl|Mm7|chr19 (4095864-4095735)
               


               
               507-635, gnl|bosTau2|chr29 (39771600-39771472)
               

               
               507-635, gnl|Hg17|chr11 (66919744-66919872)
               

               
               507-635, gnl|Mm7|chr19 (4092600-4092477)

	181-310, gnl\|bosTau2\|chr29 (39773816-39773687)
	181-310, gnl\|Hg17\|chr11 (66916700-66916829)
	181-310, gnl\|Mm7\|chr19 (4095864-4095735)

	507-635, gnl\|bosTau2\|chr29 (39771600-39771472)
	507-635, gnl\|Hg17\|chr11 (66919744-66919872)
	507-635, gnl\|Mm7\|chr19 (4092600-4092477)