Ss1.1-Pig2-49M24.5
|
TAAAATTGGTGCACGGAGCCGTGATTCATCTGAGCGACAGCCTTTCCCGTAAAGGGTGTG
AACCTTGGGGGTCCGCGCAGACGCTGACGGTTAAGTTCCTGCCCTCAGACCCTAACCACT
TCGTCGTTGGCACAGACTTGGGCCTAATCAGCCACGGCTCCAGGCAGGACTCGAGGGCGT
CCCCCAGACTGTTCCGACCCCAGCAGCCGGGCGTGAGGCCGGTGAGAGTGACCGCCATCG
ACTTCTCACCGTTTGGAGAACCCGTGTTTCTGGCCGGCTGTTCTGACGGGAGCATCCGCC
TGCACCAGCTGGCGGCCGAGCGCCCCCTCCTGCAGTGGGAGGACAGCACCGGCGGCCGTG
CGGTCACCGGCCTGCGCTGGGCCCCGACCAGACCTGCCGTGTTCCTGGTCCAGGACGACG
CATCCTGTGTGTATATTTGGGACCTCCTGGAAAGCGATTTGGGTCCTGTAGCCAAGCACC
CCGTCTCTCCAGACAAGCTGGTGGCCATGACCGTCGTGGGGGAAGCAGAGAAGACCCGCG
GTGGCTTCCTGGCGTTGGTGCTGGCCAGAGCCTCGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAAAATTGGTGCACGGAGCCGTGATTCATCTGAGCGACAGCCTTTCCCGTAAAGGGTGTG
AACCTTGGGGGTCCGCGCAGACGCTGACGGTTAAGTTCCTGCCCTCAGACCCTAACCACT
TCGTCGTTGGCACAGACTTGGGCCTAATCAGCCACGGCTCCAGGCAGGACTCGAGGGCGT
CCCCCAGACTGTTCCGACCCCAGCAGCCGGGCGTGAGGCCGGTGAGAGTGACCGCCATCG
ACTTCTCACCGTTTGGAGAACCCGTGTTTCTGGCCGGCTGTTCTGACGGGAGCATCCGCC
TGCACCAGCTGGCGGCCGAGCGCCCCCTCCTGCAGTGGGAGGACAGCACCGGCGGCCGTG
CGGTCACCGGCCTGCGCTGGGCCCCGACCAGACCTGCCGTGTTCCTGGTCCAGGACGACG
CATCCTGTGTGTATATTTGGGACCTCCTGGAAAGCGATTTGGGTCCTGTAGCCAAGCACC
CCGTCTCTCCAGACAAGCTGGTGGCCATGACCGTCGTGGGGGAAGCAGAGAAGACCCGCG
GTGGCTTCCTGGCGTTGGTGCTGGCCAGAGCCTCGG
|
|
gi|20987334|gb|AAH21371.1| |
Protein identifier
|
gi|20987334|gb|AAH21371.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
38-141, gnl|bosTau2|chr4 (67512671-67512774) |
|
38-141, gnl|canFam2|chr16 (23809386-23809498) |
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38-141, gnl|danRer3|chr19 (11755372-11755464) |
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38-141, gnl|dasNov1|scaffold_262524 (3416-3532) |
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38-141, gnl|echTel1|scaffold_284405 (639-754) |
|
38-141, gnl|fr1|chrUn (134961045-134961112) |
|
38-141, gnl|galGal2|chr2 (8995986-8996102) |
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38-141, gnl|hg17|chr7 (158226288-158226406) |
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38-141, gnl|Hg17|chr7 (158226293-158226396) |
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38-141, gnl|loxAfr1|scaffold_21820 (10690-10808) |
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38-141, gnl|mm7|chr12 (113945111-113944994) |
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38-141, gnl|Mm7|chr12 (113945105-113945002) |
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38-141, gnl|monDom2|scaffold_7 (22030747-22030865) |
|
38-141, gnl|oryCun1|scaffold_176775 (54939-54822) |
|
38-141, gnl|panTro1|chr6 (161157463-161157581) |
|
38-141, gnl|rheMac2|chr3 (196000721-196000839) |
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38-141, gnl|rn3|chr6 (143492204-143492089) |
|
38-141, gnl|tetNig1|chr6 (4245707-4245774) |
| |
|
272-495, gnl|bosTau2|chr4 (67516243-67516466) |
|
272-495, gnl|Hg17|chr7 (158234091-158234314) |
|
272-495, gnl|Mm7|chr12 (113943270-113943047) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
38-141, gnl|bosTau2|chr4 (67512671-67512774) |
|
38-141, gnl|canFam2|chr16 (23809386-23809498) |
|
38-141, gnl|danRer3|chr19 (11755372-11755464) |
|
38-141, gnl|dasNov1|scaffold_262524 (3416-3532) |
|
38-141, gnl|echTel1|scaffold_284405 (639-754) |
|
38-141, gnl|fr1|chrUn (134961045-134961112) |
|
38-141, gnl|galGal2|chr2 (8995986-8996102) |
|
38-141, gnl|hg17|chr7 (158226288-158226406) |
|
38-141, gnl|Hg17|chr7 (158226293-158226396) |
|
38-141, gnl|loxAfr1|scaffold_21820 (10690-10808) |
|
38-141, gnl|mm7|chr12 (113945111-113944994) |
|
38-141, gnl|Mm7|chr12 (113945105-113945002) |
|
38-141, gnl|monDom2|scaffold_7 (22030747-22030865) |
|
38-141, gnl|oryCun1|scaffold_176775 (54939-54822) |
|
38-141, gnl|panTro1|chr6 (161157463-161157581) |
|
38-141, gnl|rheMac2|chr3 (196000721-196000839) |
|
38-141, gnl|rn3|chr6 (143492204-143492089) |
|
38-141, gnl|tetNig1|chr6 (4245707-4245774) |
| |
|
272-495, gnl|bosTau2|chr4 (67516243-67516466) |
|
272-495, gnl|Hg17|chr7 (158234091-158234314) |
|
272-495, gnl|Mm7|chr12 (113943270-113943047) |
