Non-Coding RNA Search

Ss1.1-Pig2-4F21.5

Sequence:


               
               TCAAAGCCAGTGAGCAGGCCAAGGCCGTGAGGGGCTTCCAGGTGAAGCTGGGCAAGGTCA
GCCGCCTCATCTTCCCCATCATCTGCCAGAACCCCGGCGAGCTCTCGGACTTCACCTTGA
GGGTTCAGGTGAAAGACGACCAGGAGGCCATCCTGACCCAGTTCTGCGTCCAGACGCCCC
AGCCGCCCCCCAAAAGTGCCATCAAGCCGTCCGGGCAGAGGCGGTTCCTCAAGAAGAACG
AGGTCGGCAAGATCATCCTGTCCCCGTTCGCGGCCACCACCAAGTACCCGACGTTTCAGG
ACCGCCCGGTGTCCAGCCTCAAGTTCGGCAAGCTGCTCAAGACGGTGGTGCGGCAGAGCA
AGAACCACTACCTGCTGGAGTACAAGAAGGGGGACGCCATCGCCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAAAGCCAGTGAGCAGGCCAAGGCCGTGAGGGGCTTCCAGGTGAAGCTGGGCAAGGTCA
GCCGCCTCATCTTCCCCATCATCTGCCAGAACCCCGGCGAGCTCTCGGACTTCACCTTGA
GGGTTCAGGTGAAAGACGACCAGGAGGCCATCCTGACCCAGTTCTGCGTCCAGACGCCCC
AGCCGCCCCCCAAAAGTGCCATCAAGCCGTCCGGGCAGAGGCGGTTCCTCAAGAAGAACG
AGGTCGGCAAGATCATCCTGTCCCCGTTCGCGGCCACCACCAAGTACCCGACGTTTCAGG
ACCGCCCGGTGTCCAGCCTCAAGTTCGGCAAGCTGCTCAAGACGGTGGTGCGGCAGAGCA
AGAACCACTACCTGCTGGAGTACAAGAAGGGGGACGCCATCGCCCTGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-159, - strand, RNAz p=0.795319

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.795319

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               48-179, - strand, RNAmicro p=0.996844

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               48-179, - strand, RNAmicro p=0.996844

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-408, gnl|bosTau2|chr3 (81132247-81131840)
               

               
               1-408, gnl|Hg17|chr2 (235733062-235733469)
               

               
               1-408, gnl|Mm7|chr1 (89049854-89050261)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-408, gnl|bosTau2|chr3 (81132247-81131840)
               

               
               1-408, gnl|Hg17|chr2 (235733062-235733469)
               

               
               1-408, gnl|Mm7|chr1 (89049854-89050261)

	1-408, gnl\|bosTau2\|chr3 (81132247-81131840)
	1-408, gnl\|Hg17\|chr2 (235733062-235733469)
	1-408, gnl\|Mm7\|chr1 (89049854-89050261)