Non-Coding RNA Search

Ss1.1-Pig2-51C02.5

Sequence:


               
               ATTTATTTTCATTCACTGAAAAATTAAAGTCTTGAAAGCCTACATATTTAATGTGTGACA
TAAAAAGTAGCAAGCGGATGCACTCTGACCTATTCCGAATACCCATCTACGTATTTGAAG
AGGAGGATATTTATTCAATTTGGGAATAAACTCTTTCTCAAAGCTTCAACCAATAAATAA
ACAAAAGGGCAGCAGTAAAAACATGTGCGAGGCAGACTATGTGTATGATATCCTGCCAGA
AAATGTAGAAATAGGGAAAATTTACCACGCATTCCTGAGAGCCTAATGAAGCAGCACTAA
GATTGCTCGCACACTATCCGTCAGGCTGGGAACACTGGCAATTTCTCACTTTCATGCAGA
ACAGCATTGGTCACGTCACATCTCTTGCAACAAAGGTCATTTTTTTCCTCTCCCTCAGTC
AAAAGAGTAAAACTGTAATTGTTCCAGAAGTTTTCATTTTTCTTAAGCTAATGTTAATTT
AATGGGTATGCTTTTCCTACTCCCCCTGACTGCAGGTAACGAGGGGCTGTGCTGTCTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTATTTTCATTCACTGAAAAATTAAAGTCTTGAAAGCCTACATATTTAATGTGTGACA
TAAAAAGTAGCAAGCGGATGCACTCTGACCTATTCCGAATACCCATCTACGTATTTGAAG
AGGAGGATATTTATTCAATTTGGGAATAAACTCTTTCTCAAAGCTTCAACCAATAAATAA
ACAAAAGGGCAGCAGTAAAAACATGTGCGAGGCAGACTATGTGTATGATATCCTGCCAGA
AAATGTAGAAATAGGGAAAATTTACCACGCATTCCTGAGAGCCTAATGAAGCAGCACTAA
GATTGCTCGCACACTATCCGTCAGGCTGGGAACACTGGCAATTTCTCACTTTCATGCAGA
ACAGCATTGGTCACGTCACATCTCTTGCAACAAAGGTCATTTTTTTCCTCTCCCTCAGTC
AAAAGAGTAAAACTGTAATTGTTCCAGAAGTTTTCATTTTTCTTAAGCTAATGTTAATTT
AATGGGTATGCTTTTCCTACTCCCCCTGACTGCAGGTAACGAGGGGCTGTGCTGTCTCCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               224-332, - strand, RNAz p=0.630122

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               224-332, - strand, RNAz p=0.630122

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AK131554, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AK131554, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-540, gnl|bosTau2|chr17 (17204775-17205301)
               

               
               2-540, gnl|Hg17|chr12 (40140389-40139868)
               

               
               2-540, gnl|Mm7|chr15 (92703225-92702657)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-540, gnl|bosTau2|chr17 (17204775-17205301)
               

               
               2-540, gnl|Hg17|chr12 (40140389-40139868)
               

               
               2-540, gnl|Mm7|chr15 (92703225-92702657)

	2-540, gnl\|bosTau2\|chr17 (17204775-17205301)
	2-540, gnl\|Hg17\|chr12 (40140389-40139868)
	2-540, gnl\|Mm7\|chr15 (92703225-92702657)