Ss1.1-Pig2-54O11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCCTTTAGCCATTCGCAGGGGGAAAGGATTGACCCGCAAGGTCGGGGATTAAGAATCA TGTTGCATGAAGCAAAGGACAGGCAGAAGTTCGTCAGTGATGTTCAGTATCTGCGGGACA TGCAGCATAAGGCGGACTCAGAATATCAGGCTTGTCTGAGACGACAGGAATACAGAAGAG ACTCAAATGAGAAGAAACGAGATCCGTTTTGGGGGCAAGAGACAACTGTTGGGAGATCCC GGTTTTCAAGTGGGTCATCTTCCAAACAGAGTTCTGGTGAGGAGGAGCTCCTGGCCGAAC CAAGATTATCTGCCAAGAGTTCTGCATGTAAGAGTGATTCCAGACTTCCAGCCATTGGCC AGACATCAGTCAAGCAGAAACATAAAAGCACCTTGACTCCAAAGAAATCGGAGAAATCGG GCCCCAGCAAACCCCCTCCCGGTGCCAGCAGCGAGCACCCCCTGTTCTGTGTTGAATATT CCCCTTACTGCTCCGTCTTTGCGTTCTCCCCTGTCCTGCAGCCCAATACCAATTGCTGCT GCCTCCTCCTGCCGCTTGTGCCACCCACACCCCCAGCGGCCCAGGACTCTGTCCCCCATC TCCCTCCAGTTTCCTTTCCCTCCTTCCTGAGCCCCACCGCCTCCCCGCCGGGCCCCATGC CCGAGTCCCCAGCAGCCCTGTGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCCTTTAGCCATTCGCAGGGGGAAAGGATTGACCCGCAAGGTCGGGGATTAAGAATCA TGTTGCATGAAGCAAAGGACAGGCAGAAGTTCGTCAGTGATGTTCAGTATCTGCGGGACA TGCAGCATAAGGCGGACTCAGAATATCAGGCTTGTCTGAGACGACAGGAATACAGAAGAG ACTCAAATGAGAAGAAACGAGATCCGTTTTGGGGGCAAGAGACAACTGTTGGGAGATCCC GGTTTTCAAGTGGGTCATCTTCCAAACAGAGTTCTGGTGAGGAGGAGCTCCTGGCCGAAC CAAGATTATCTGCCAAGAGTTCTGCATGTAAGAGTGATTCCAGACTTCCAGCCATTGGCC AGACATCAGTCAAGCAGAAACATAAAAGCACCTTGACTCCAAAGAAATCGGAGAAATCGG GCCCCAGCAAACCCCCTCCCGGTGCCAGCAGCGAGCACCCCCTGTTCTGTGTTGAATATT CCCCTTACTGCTCCGTCTTTGCGTTCTCCCCTGTCCTGCAGCCCAATACCAATTGCTGCT GCCTCCTCCTGCCGCTTGTGCCACCCACACCCCCAGCGGCCCAGGACTCTGTCCCCCATC TCCCTCCAGTTTCCTTTCCCTCCTTCCTGAGCCCCACCGCCTCCCCGCCGGGCCCCATGC CCGAGTCCCCAGCAGCCCTGTGCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 481-597, - strand, RNAz p=0.557882 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 481-597, - strand, RNAz p=0.557882 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 147-269, gnl|bosTau2|chr19 (39585580-39585458) | |
| 147-269, gnl|canFam2|chr9 (14077743-14078100) | |
| 147-269, gnl|dasNov1|scaffold_38368 (9435-9787) | |
| 147-269, gnl|echTel1|scaffold_319191 (79888-80235) | |
| 147-269, gnl|hg17|chr17 (58219500-58219856) | |
| 147-269, gnl|Hg17|chr17 (58219695-58219573) | |
| 147-269, gnl|mm7|chr11 (105547796-105548160) | |
| 147-269, gnl|Mm7|chr11 (105547979-105547860) | |
| 147-269, gnl|oryCun1|scaffold_89848 (7277-7621) | |
| 147-269, gnl|panTro1|chr19 (46932691-46932331) | |
| 147-269, gnl|rheMac2|chr16 (58301758-58302157) | |
| 147-269, gnl|rn3|chr10 (94851889-94852257) | |
| 441-684, gnl|bosTau2|chr19 (39548344-39548098) | |
| 441-684, gnl|canFam2|chr9 (14046027-14046560) | |
| 441-684, gnl|dasNov1|scaffold_170388 (262-797) | |
| 441-684, gnl|echTel1|scaffold_319191 (46822-47345) | |
| 441-684, gnl|hg17|chr17 (58181082-58181607) | |
| 441-684, gnl|Hg17|chr17 (58181630-58181384) | |
| 441-684, gnl|mm7|chr11 (105510706-105511219) | |
| 441-684, gnl|Mm7|chr11 (105511242-105510999) | |
| 441-684, gnl|monDom2|scaffold_18 (37370831-37370274) | |
| 441-684, gnl|oryCun1|scaffold_145063 (17790-17295) | |
| 441-684, gnl|panTro1|chr19 (46977004-46976478) | |
| 441-684, gnl|rheMac2|chr16 (58258272-58258794) | |
| 441-684, gnl|rn3|chr10 (94818489-94818989) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 147-269, gnl|bosTau2|chr19 (39585580-39585458) | |
| 147-269, gnl|canFam2|chr9 (14077743-14078100) | |
| 147-269, gnl|dasNov1|scaffold_38368 (9435-9787) | |
| 147-269, gnl|echTel1|scaffold_319191 (79888-80235) | |
| 147-269, gnl|hg17|chr17 (58219500-58219856) | |
| 147-269, gnl|Hg17|chr17 (58219695-58219573) | |
| 147-269, gnl|mm7|chr11 (105547796-105548160) | |
| 147-269, gnl|Mm7|chr11 (105547979-105547860) | |
| 147-269, gnl|oryCun1|scaffold_89848 (7277-7621) | |
| 147-269, gnl|panTro1|chr19 (46932691-46932331) | |
| 147-269, gnl|rheMac2|chr16 (58301758-58302157) | |
| 147-269, gnl|rn3|chr10 (94851889-94852257) | |
| 441-684, gnl|bosTau2|chr19 (39548344-39548098) | |
| 441-684, gnl|canFam2|chr9 (14046027-14046560) | |
| 441-684, gnl|dasNov1|scaffold_170388 (262-797) | |
| 441-684, gnl|echTel1|scaffold_319191 (46822-47345) | |
| 441-684, gnl|hg17|chr17 (58181082-58181607) | |
| 441-684, gnl|Hg17|chr17 (58181630-58181384) | |
| 441-684, gnl|mm7|chr11 (105510706-105511219) | |
| 441-684, gnl|Mm7|chr11 (105511242-105510999) | |
| 441-684, gnl|monDom2|scaffold_18 (37370831-37370274) | |
| 441-684, gnl|oryCun1|scaffold_145063 (17790-17295) | |
| 441-684, gnl|panTro1|chr19 (46977004-46976478) | |
| 441-684, gnl|rheMac2|chr16 (58258272-58258794) | |
| 441-684, gnl|rn3|chr10 (94818489-94818989) |