Non-Coding RNA Search

Ss1.1-Pig2-58F05.5

Sequence:


               
               GCCTCACAGGAGGAGCTGGCGGCGAGCCGTGGGCCGCTCTGGCCTCAGCCAGAGTTCCCG
GCCAAACACGGGAGGAGAGATGCCCTGGACCGTCCTGCTCTTTGCAGCTGGTTCCTTGGC
GATTCCAGCGCCGTCCATCATGCTGGTGCCTCCACACCCCAGCAGCCAGGAGGACCCCAT
CCACATCTCGTGTGTGGCCCCCCAGGAATTCCCAGGGGCGAATTTCACACTGTACCAAGG
CGGGCAGGTGGTGCAGCAGGAGCAGGCCCCTGTGGACCAGCTCAAGGTCACCTTCAACCT
GAGTGGTGGCAGCCAGGAGGCTCCAGGAAGACCATTCTATTGCCAGTATGGCGTCCTCGG
TGAGCACAGGCAGCCCCAGCTATCAGACCTGAGTGAGCCCATGCACATCTCCTTCCCAGT
GCCCACCTGGATCCTGGCACTCTCCTTGAGCCTGGCTGGAGCCTTCCTTCTCCTTGCTGG
GCTGGTGATCATTGCCATGGTCGTCAGAAAAGTTAAATTAAAAAAATTGCAGAAGAAAAG
AGAGCGAGAATCCTGCTGGGCCCAAGTCAACTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTCACAGGAGGAGCTGGCGGCGAGCCGTGGGCCGCTCTGGCCTCAGCCAGAGTTCCCG
GCCAAACACGGGAGGAGAGATGCCCTGGACCGTCCTGCTCTTTGCAGCTGGTTCCTTGGC
GATTCCAGCGCCGTCCATCATGCTGGTGCCTCCACACCCCAGCAGCCAGGAGGACCCCAT
CCACATCTCGTGTGTGGCCCCCCAGGAATTCCCAGGGGCGAATTTCACACTGTACCAAGG
CGGGCAGGTGGTGCAGCAGGAGCAGGCCCCTGTGGACCAGCTCAAGGTCACCTTCAACCT
GAGTGGTGGCAGCCAGGAGGCTCCAGGAAGACCATTCTATTGCCAGTATGGCGTCCTCGG
TGAGCACAGGCAGCCCCAGCTATCAGACCTGAGTGAGCCCATGCACATCTCCTTCCCAGT
GCCCACCTGGATCCTGGCACTCTCCTTGAGCCTGGCTGGAGCCTTCCTTCTCCTTGCTGG
GCTGGTGATCATTGCCATGGTCGTCAGAAAAGTTAAATTAAAAAAATTGCAGAAGAAAAG
AGAGCGAGAATCCTGCTGGGCCCAAGTCAACTTCCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|22051591|ref|XP_172995.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|22051591|ref|XP_172995.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               107-225, - strand, RNAz p=0.982578

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               107-225, - strand, RNAz p=0.982578

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               107-419, gnl|bosTau2|chr7 (9944896-9945208)
               

               
               107-419, gnl|Hg17|chr19 (10821931-10822243)
               

               
               107-419, gnl|Mm7|chr9 (21406604-21406928)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-419, gnl|bosTau2|chr7 (9944896-9945208)
               

               
               107-419, gnl|Hg17|chr19 (10821931-10822243)
               

               
               107-419, gnl|Mm7|chr9 (21406604-21406928)

	107-419, gnl\|bosTau2\|chr7 (9944896-9945208)
	107-419, gnl\|Hg17\|chr19 (10821931-10822243)
	107-419, gnl\|Mm7\|chr9 (21406604-21406928)