Ss1.1-Pig2-5A08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTATGTGCTCAGCGGGGAACCTCCGGNAGAAGTGGTGAAGAAAGCCCTTNGAGTCATCA CCATTGCTGTTCCTCCTGCTCTACCTGCTGCTCTGACCACAGGCATTATCTATGCCCAGC GCAGGCTNGAAAAAGAGAGGCATCTTTTGCATTAGTCCACAGAGGATCAATGTATGTGGA CAATTAAACCTTGTCTGCTTTGACAAGACAGGCACCTTAACGAGGGATGGCTTGGATCTC TGGGGAGTCATGCCTTGCGGTAGGAACGGCTTCCAGGAAGTCCACAGCTTTGCCTCAGGC AAGGCTCTGCCCTGGGGCCCACTGTGTGCGGCCATGGCCAGCTGCCACTCTCTGATCCTC CTCGATGGGACCATCCAAGGAGACCCACTGGACCTCAAAATGTTTGAAGCCACCACATGG GAAATGGCGACTTCTGAGGACGATTTCCATATCAAGGGAGCACCGGCATGTGCCATGGTT GTTAAGCCCTGCAAAACAGCCAGCCAGGTCCCAGTGGAAGGGATTGCAATCCTGCACCAG TTCCCATTCTCATCAGCGCTACAGAGGATGACAGTCATTGTCCAAGAGATGGGGGGTGAC CGGCTGGCATTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTATGTGCTCAGCGGGGAACCTCCGGNAGAAGTGGTGAAGAAAGCCCTTNGAGTCATCA CCATTGCTGTTCCTCCTGCTCTACCTGCTGCTCTGACCACAGGCATTATCTATGCCCAGC GCAGGCTNGAAAAAGAGAGGCATCTTTTGCATTAGTCCACAGAGGATCAATGTATGTGGA CAATTAAACCTTGTCTGCTTTGACAAGACAGGCACCTTAACGAGGGATGGCTTGGATCTC TGGGGAGTCATGCCTTGCGGTAGGAACGGCTTCCAGGAAGTCCACAGCTTTGCCTCAGGC AAGGCTCTGCCCTGGGGCCCACTGTGTGCGGCCATGGCCAGCTGCCACTCTCTGATCCTC CTCGATGGGACCATCCAAGGAGACCCACTGGACCTCAAAATGTTTGAAGCCACCACATGG GAAATGGCGACTTCTGAGGACGATTTCCATATCAAGGGAGCACCGGCATGTGCCATGGTT GTTAAGCCCTGCAAAACAGCCAGCCAGGTCCCAGTGGAAGGGATTGCAATCCTGCACCAG TTCCCATTCTCATCAGCGCTACAGAGGATGACAGTCATTGTCCAAGAGATGGGGGGTGAC CGGCTGGCATTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 89-207, - strand, RNAz p=0.988165 | |
| 271-424, - strand, RNAz p=0.966659 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 89-207, - strand, RNAz p=0.988165 | |
| 271-424, - strand, RNAz p=0.966659 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 17-207, gnl|bosTau2|chr1 (46140757-46140946) | |
| 17-207, gnl|Hg17|chr3 (194665620-194665431) | |
| 17-207, gnl|Mm7|chr16 (29121764-29121575) | |
| 271-424, gnl|bosTau2|chr1 (46147423-46147576) | |
| 271-424, gnl|canFam2|chr34 (27954347-27954477) | |
| 271-424, gnl|danRer3|chrNA (157776076-157776201) | |
| 271-424, gnl|dasNov1|scaffold_12142 (8814-8684) | |
| 271-424, gnl|echTel1|scaffold_151015 (298-421) | |
| 271-424, gnl|fr1|chrUn (142668234-142668137) | |
| 271-424, gnl|galGal2|chr9 (12503720-12503586) | |
| 271-424, gnl|hg17|chr3 (194659561-194659691) | |
| 271-424, gnl|Hg17|chr3 (194659721-194659568) | |
| 271-424, gnl|loxAfr1|scaffold_47980 (33762-33632) | |
| 271-424, gnl|mm7|chr16 (29116787-29116917) | |
| 271-424, gnl|Mm7|chr16 (29116947-29116794) | |
| 271-424, gnl|monDom2|scaffold_92 (4805512-4805650) | |
| 271-424, gnl|oryCun1|scaffold_191892 (4119-3999) | |
| 271-424, gnl|panTro1|chr2 (198766633-198766763) | |
| 271-424, gnl|rheMac2|chr2 (185676463-185676593) | |
| 271-424, gnl|rn3|chr11 (73267752-73267622) | |
| 271-424, gnl|tetNig1|chr15 (3090474-3090382) | |
| 271-424, gnl|xenTro1|scaffold_213 (1390380-1390506) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 17-207, gnl|bosTau2|chr1 (46140757-46140946) | |
| 17-207, gnl|Hg17|chr3 (194665620-194665431) | |
| 17-207, gnl|Mm7|chr16 (29121764-29121575) | |
| 271-424, gnl|bosTau2|chr1 (46147423-46147576) | |
| 271-424, gnl|canFam2|chr34 (27954347-27954477) | |
| 271-424, gnl|danRer3|chrNA (157776076-157776201) | |
| 271-424, gnl|dasNov1|scaffold_12142 (8814-8684) | |
| 271-424, gnl|echTel1|scaffold_151015 (298-421) | |
| 271-424, gnl|fr1|chrUn (142668234-142668137) | |
| 271-424, gnl|galGal2|chr9 (12503720-12503586) | |
| 271-424, gnl|hg17|chr3 (194659561-194659691) | |
| 271-424, gnl|Hg17|chr3 (194659721-194659568) | |
| 271-424, gnl|loxAfr1|scaffold_47980 (33762-33632) | |
| 271-424, gnl|mm7|chr16 (29116787-29116917) | |
| 271-424, gnl|Mm7|chr16 (29116947-29116794) | |
| 271-424, gnl|monDom2|scaffold_92 (4805512-4805650) | |
| 271-424, gnl|oryCun1|scaffold_191892 (4119-3999) | |
| 271-424, gnl|panTro1|chr2 (198766633-198766763) | |
| 271-424, gnl|rheMac2|chr2 (185676463-185676593) | |
| 271-424, gnl|rn3|chr11 (73267752-73267622) | |
| 271-424, gnl|tetNig1|chr15 (3090474-3090382) | |
| 271-424, gnl|xenTro1|scaffold_213 (1390380-1390506) |