Ss1.1-Pig2-64F13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGTCCGCCGAGGCACGGAAGGAGTACAGCAATGGGACAGGACTCGGGTCAAGGAGCAGC AGGCGGGTTTGCATGACCAACTGCCCAACGCTCATTGTCATGGTGGGGCTGCCTGCCAGG GGCAAGACCTACATCTCTAAGAAGCTGACTCGCTACCTGAACTGGATTGGCGTGCCCACG CGGGAATTCAACGTTGGCCAGTACCGCCGGGACATGGTCAAGACGTACAAATCTTTCGAG TTTTTCCTTCCAGACAACGAAGAGGGCCTGAAAATCAGGAAGCAGTGTGCCCTGGCAGCT CTCCGTGATGTTCGGCGGTTTCTTAGTGAGGAGGGGGGACATGTGGCGGTTTTTGATGCA ACAAATACCACCCGAGAACGGAGAGCGACCATCTTCAATTTTGGGGAACAGAACGGCTAC AAGACCTTTTTTGTTGAGTCCATCTGTGTGGATCCTGAGGTCATAGCTGCCAACATCGTG CAAGTGAAACTGGGCAGCCCTGACTATGTCAACCGCGATAGTGATGAGGCCACGGAGGAT TTCATGAGGCGCATCGAGTGTTACGAGAATTCGTACGAGTCACTAGACGAGGACCTGGAC AGGGAGCTGTCCTACATCAAGATCATGGACGTGGGGCAGAGCTACGTGGTGAGCCGCGTG GCTGACCACATCCAGAGCCGCATCGTGTATTACCTCATGAACATCCATGTGACGCCCCGC TCCATCTACCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGTCCGCCGAGGCACGGAAGGAGTACAGCAATGGGACAGGACTCGGGTCAAGGAGCAGC AGGCGGGTTTGCATGACCAACTGCCCAACGCTCATTGTCATGGTGGGGCTGCCTGCCAGG GGCAAGACCTACATCTCTAAGAAGCTGACTCGCTACCTGAACTGGATTGGCGTGCCCACG CGGGAATTCAACGTTGGCCAGTACCGCCGGGACATGGTCAAGACGTACAAATCTTTCGAG TTTTTCCTTCCAGACAACGAAGAGGGCCTGAAAATCAGGAAGCAGTGTGCCCTGGCAGCT CTCCGTGATGTTCGGCGGTTTCTTAGTGAGGAGGGGGGACATGTGGCGGTTTTTGATGCA ACAAATACCACCCGAGAACGGAGAGCGACCATCTTCAATTTTGGGGAACAGAACGGCTAC AAGACCTTTTTTGTTGAGTCCATCTGTGTGGATCCTGAGGTCATAGCTGCCAACATCGTG CAAGTGAAACTGGGCAGCCCTGACTATGTCAACCGCGATAGTGATGAGGCCACGGAGGAT TTCATGAGGCGCATCGAGTGTTACGAGAATTCGTACGAGTCACTAGACGAGGACCTGGAC AGGGAGCTGTCCTACATCAAGATCATGGACGTGGGGCAGAGCTACGTGGTGAGCCGCGTG GCTGACCACATCCAGAGCCGCATCGTGTATTACCTCATGAACATCCATGTGACGCCCCGC TCCATCTACCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 615-732, - strand, RNAz p=0.531303 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 615-732, - strand, RNAz p=0.531303 |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 67-184, gnl|bosTau2|chr22 (39654478-39654361) | |
| 67-184, gnl|Hg17|chr3 (48562672-48562555) | |
| 67-184, gnl|Mm7|chr9 (108709121-108709238) | |
| 76-180, gnl|bosTau2|chr13 (13152017-13152121) | |
| 76-180, gnl|canFam2|chr2 (32591538-32591372) | |
| 76-180, gnl|danRer3|chr4 (22669223-22669371) | |
| 76-180, gnl|dasNov1|scaffold_121608 (3440-3272) | |
| 76-180, gnl|echTel1|scaffold_313072 (39691-39528) | |
| 76-180, gnl|fr1|chrUn (280042232-280042083) | |
| 76-180, gnl|galGal2|chr1 (38714-38559) | |
| 76-180, gnl|hg17|chr10 (6295575-6295741) | |
| 76-180, gnl|Hg17|chr10 (6295609-6295713) | |
| 76-180, gnl|loxAfr1|scaffold_31854 (17327-17175) | |
| 76-180, gnl|mm7|chr2 (11433202-11433043) | |
| 76-180, gnl|Mm7|chr2 (11433169-11433065) | |
| 76-180, gnl|monDom2|scaffold_30 (2318940-2319108) | |
| 76-180, gnl|oryCun1|scaffold_208478 (48090-48258) | |
| 76-180, gnl|panTro1|chr8 (6383556-6383722) | |
| 76-180, gnl|rheMac2|chr9 (6497376-6497542) | |
| 76-180, gnl|rn3|chr17 (78259392-78259552) | |
| 76-180, gnl|tetNig1|chrUn_random (54852805-54852661) | |
| 76-180, gnl|xenTro1|scaffold_20 (189923-189777) | |
| 595-732, gnl|bosTau2|chr22 (39641953-39641816) | |
| 595-732, gnl|canFam2|chr20 (43571518-43571327) | |
| 595-732, gnl|danRer3|chr11 (34044411-34044579) | |
| 595-732, gnl|dasNov1|scaffold_87586 (1191-1359) | |
| 595-732, gnl|echTel1|scaffold_297968 (4648-4484) | |
| 595-732, gnl|fr1|chrUn (228469812-228469633) | |
| 595-732, gnl|galGal2|chr12 (1213718-1213895) | |
| 595-732, gnl|hg17|chr3 (48548676-48548857) | |
| 595-732, gnl|Hg17|chr3 (48548910-48548771) | |
| 595-732, gnl|loxAfr1|scaffold_59943 (4732-4555) | |
| 595-732, gnl|mm7|chr9 (108720938-108720757) | |
| 595-732, gnl|Mm7|chr9 (108720702-108720841) | |
| 595-732, gnl|monDom2|scaffold_5 (84019652-84019475) | |
| 595-732, gnl|oryCun1|scaffold_97630 (13023-13192) | |
| 595-732, gnl|panTro1|chr2 (50034988-50035169) | |
| 595-732, gnl|rheMac2|chr2 (87942835-87942655) | |
| 595-732, gnl|rn3|chr8 (114051105-114050924) | |
| 595-732, gnl|tetNig1|chr11 (6381489-6381312) | |
| 595-732, gnl|xenTro1|scaffold_425 (668279-668097) | |
| 600-731, gnl|bosTau2|chr13 (13157973-13158104) | |
| 600-731, gnl|canFam2|chr2 (32585530-32585310) | |
| 600-731, gnl|danRer3|chr4 (22671832-22672050) | |
| 600-731, gnl|dasNov1|scaffold_5005 (54093-54291) | |
| 600-731, gnl|echTel1|scaffold_200777 (1872-1654) | |
| 600-731, gnl|fr1|chrUn (280041185-280040967) | |
| 600-731, gnl|galGal2|chr1 (34628-34408) | |
| 600-731, gnl|hg17|chr10 (6302619-6302839) | |
| 600-731, gnl|Hg17|chr10 (6302624-6302755) | |
| 600-731, gnl|loxAfr1|scaffold_57652 (5672-5480) | |
| 600-731, gnl|mm7|chr2 (11424030-11423810) | |
| 600-731, gnl|Mm7|chr2 (11424023-11423892) | |
| 600-731, gnl|monDom2|scaffold_30 (2340012-2340231) | |
| 600-731, gnl|oryCun1|scaffold_208478 (55201-55421) | |
| 600-731, gnl|panTro1|chr8 (6390554-6390774) | |
| 600-731, gnl|rheMac2|chr9 (6504408-6504628) | |
| 600-731, gnl|rn3|chr17 (78268498-78268718) | |
| 600-731, gnl|tetNig1|chrUn_random (54851773-54851573) | |
| 600-731, gnl|xenTro1|scaffold_20 (187618-187401) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 67-184, gnl|bosTau2|chr22 (39654478-39654361) | |
| 67-184, gnl|Hg17|chr3 (48562672-48562555) | |
| 67-184, gnl|Mm7|chr9 (108709121-108709238) | |
| 76-180, gnl|bosTau2|chr13 (13152017-13152121) | |
| 76-180, gnl|canFam2|chr2 (32591538-32591372) | |
| 76-180, gnl|danRer3|chr4 (22669223-22669371) | |
| 76-180, gnl|dasNov1|scaffold_121608 (3440-3272) | |
| 76-180, gnl|echTel1|scaffold_313072 (39691-39528) | |
| 76-180, gnl|fr1|chrUn (280042232-280042083) | |
| 76-180, gnl|galGal2|chr1 (38714-38559) | |
| 76-180, gnl|hg17|chr10 (6295575-6295741) | |
| 76-180, gnl|Hg17|chr10 (6295609-6295713) | |
| 76-180, gnl|loxAfr1|scaffold_31854 (17327-17175) | |
| 76-180, gnl|mm7|chr2 (11433202-11433043) | |
| 76-180, gnl|Mm7|chr2 (11433169-11433065) | |
| 76-180, gnl|monDom2|scaffold_30 (2318940-2319108) | |
| 76-180, gnl|oryCun1|scaffold_208478 (48090-48258) | |
| 76-180, gnl|panTro1|chr8 (6383556-6383722) | |
| 76-180, gnl|rheMac2|chr9 (6497376-6497542) | |
| 76-180, gnl|rn3|chr17 (78259392-78259552) | |
| 76-180, gnl|tetNig1|chrUn_random (54852805-54852661) | |
| 76-180, gnl|xenTro1|scaffold_20 (189923-189777) | |
| 595-732, gnl|bosTau2|chr22 (39641953-39641816) | |
| 595-732, gnl|canFam2|chr20 (43571518-43571327) | |
| 595-732, gnl|danRer3|chr11 (34044411-34044579) | |
| 595-732, gnl|dasNov1|scaffold_87586 (1191-1359) | |
| 595-732, gnl|echTel1|scaffold_297968 (4648-4484) | |
| 595-732, gnl|fr1|chrUn (228469812-228469633) | |
| 595-732, gnl|galGal2|chr12 (1213718-1213895) | |
| 595-732, gnl|hg17|chr3 (48548676-48548857) | |
| 595-732, gnl|Hg17|chr3 (48548910-48548771) | |
| 595-732, gnl|loxAfr1|scaffold_59943 (4732-4555) | |
| 595-732, gnl|mm7|chr9 (108720938-108720757) | |
| 595-732, gnl|Mm7|chr9 (108720702-108720841) | |
| 595-732, gnl|monDom2|scaffold_5 (84019652-84019475) | |
| 595-732, gnl|oryCun1|scaffold_97630 (13023-13192) | |
| 595-732, gnl|panTro1|chr2 (50034988-50035169) | |
| 595-732, gnl|rheMac2|chr2 (87942835-87942655) | |
| 595-732, gnl|rn3|chr8 (114051105-114050924) | |
| 595-732, gnl|tetNig1|chr11 (6381489-6381312) | |
| 595-732, gnl|xenTro1|scaffold_425 (668279-668097) | |
| 600-731, gnl|bosTau2|chr13 (13157973-13158104) | |
| 600-731, gnl|canFam2|chr2 (32585530-32585310) | |
| 600-731, gnl|danRer3|chr4 (22671832-22672050) | |
| 600-731, gnl|dasNov1|scaffold_5005 (54093-54291) | |
| 600-731, gnl|echTel1|scaffold_200777 (1872-1654) | |
| 600-731, gnl|fr1|chrUn (280041185-280040967) | |
| 600-731, gnl|galGal2|chr1 (34628-34408) | |
| 600-731, gnl|hg17|chr10 (6302619-6302839) | |
| 600-731, gnl|Hg17|chr10 (6302624-6302755) | |
| 600-731, gnl|loxAfr1|scaffold_57652 (5672-5480) | |
| 600-731, gnl|mm7|chr2 (11424030-11423810) | |
| 600-731, gnl|Mm7|chr2 (11424023-11423892) | |
| 600-731, gnl|monDom2|scaffold_30 (2340012-2340231) | |
| 600-731, gnl|oryCun1|scaffold_208478 (55201-55421) | |
| 600-731, gnl|panTro1|chr8 (6390554-6390774) | |
| 600-731, gnl|rheMac2|chr9 (6504408-6504628) | |
| 600-731, gnl|rn3|chr17 (78268498-78268718) | |
| 600-731, gnl|tetNig1|chrUn_random (54851773-54851573) | |
| 600-731, gnl|xenTro1|scaffold_20 (187618-187401) |