Ss1.1-Pig2-65E09.5
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GCCTTTGCTGCCGAGTGTCCAGCCGCGGGTTCCTCTCGCTAAAGAAAGGTCGCTGGGGTG
GTTGGTGTGGCAGTTGTGATTTCTGCCCTTTCCCCTTTCCTTTGGCTGAGCCTGACAGAA
AAGACCGGGTGCTTAGCGTCCTTCCGGATCCCTGAGAGAAAGCGGCTAACGTGGCGGCCC
CTCCGCCCCCTCCTTCGTCCCCGCGGGCGTAGCCGCCATGTTTCCTGAACACAAAATGGC
GACACGTGGCCTGGATTCGTCGCCAACGAGAAATTGGGGTCGGCCTGAAAGCTCTAGAAC
GCGCCCCTCCCCCCTCCCGGCTCCGGATGCCGATGAAATCACTTAGATGAAGTGACTAAT
TCAAGGTCACGCACTGTTCAGGATGGAATTCAGACCTTCTGATGTACTTATTGACCTGCA
CTATCTTGTGGACATGTGGATGAATTTCTACACCACCCATTTTATAGATGAGACTACTGA
GATACAGAACAACTGACTAAATAGTCACCACCCTATCCCTGGAGCCTCACTCATGACTCT
CCTCTCAGGTGAAATGTGATCTTGTCAGTGTAATATGGAAGTGGAGATTGACTCTGGAGC
TAGCCTGATGGGGCCTGAATTCTGACTCAGCCACTTACTATATGACCTTGGGTATTCATA
GCAGTGTAACCCACAATGTGAGAACACCATTGGTAACTCTGATGTACTGTTTAAGATGCC
TAATCCTATTATCCAAATAAAATCTGTTGATGTTCTCCAGGGGAGTAAGCTGTGATGGGG
ACAGAGACGGCCTGTTGTCTAACATTTACCAGCACACCGCAGGGCACAGGACCTGACTCT
TTGGAAGGATTCCCAGAAGAAGGAGAGAATTATTGGTGGAAAGATGCT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCCTTTGCTGCCGAGTGTCCAGCCGCGGGTTCCTCTCGCTAAAGAAAGGTCGCTGGGGTG
GTTGGTGTGGCAGTTGTGATTTCTGCCCTTTCCCCTTTCCTTTGGCTGAGCCTGACAGAA
AAGACCGGGTGCTTAGCGTCCTTCCGGATCCCTGAGAGAAAGCGGCTAACGTGGCGGCCC
CTCCGCCCCCTCCTTCGTCCCCGCGGGCGTAGCCGCCATGTTTCCTGAACACAAAATGGC
GACACGTGGCCTGGATTCGTCGCCAACGAGAAATTGGGGTCGGCCTGAAAGCTCTAGAAC
GCGCCCCTCCCCCCTCCCGGCTCCGGATGCCGATGAAATCACTTAGATGAAGTGACTAAT
TCAAGGTCACGCACTGTTCAGGATGGAATTCAGACCTTCTGATGTACTTATTGACCTGCA
CTATCTTGTGGACATGTGGATGAATTTCTACACCACCCATTTTATAGATGAGACTACTGA
GATACAGAACAACTGACTAAATAGTCACCACCCTATCCCTGGAGCCTCACTCATGACTCT
CCTCTCAGGTGAAATGTGATCTTGTCAGTGTAATATGGAAGTGGAGATTGACTCTGGAGC
TAGCCTGATGGGGCCTGAATTCTGACTCAGCCACTTACTATATGACCTTGGGTATTCATA
GCAGTGTAACCCACAATGTGAGAACACCATTGGTAACTCTGATGTACTGTTTAAGATGCC
TAATCCTATTATCCAAATAAAATCTGTTGATGTTCTCCAGGGGAGTAAGCTGTGATGGGG
ACAGAGACGGCCTGTTGTCTAACATTTACCAGCACACCGCAGGGCACAGGACCTGACTCT
TTGGAAGGATTCCCAGAAGAAGGAGAGAATTATTGGTGGAAAGATGCT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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468-534, - strand, RNAmicro p=0.998543 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
468-534, - strand, RNAmicro p=0.998543 |
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2-318, gnl|bosTau2|chr11 (44632167-44632480) |
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2-318, gnl|Hg17|chr2 (70225269-70224966) |
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2-318, gnl|Mm7|chr6 (86602192-86602488) |
| |
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413-540, gnl|bosTau2|chr11 (44635179-44635305) |
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413-540, gnl|canFam2|chr10 (71837918-71838818) |
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413-540, gnl|dasNov1|scaffold_7109 (35853-36778) |
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413-540, gnl|echTel1|scaffold_265147 (10387-11319) |
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413-540, gnl|hg17|chr2 (70221846-70222785) |
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413-540, gnl|Hg17|chr2 (70222471-70222341) |
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413-540, gnl|mm7|chr6 (86607741-86606988) |
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413-540, gnl|oryCun1|scaffold_210099 (60863-59921) |
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413-540, gnl|panTro1|chr12 (72532980-72533919) |
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413-540, gnl|rheMac2|chr13 (70361256-70362196) |
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413-540, gnl|rn3|chr4 (120972125-120971373) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-318, gnl|bosTau2|chr11 (44632167-44632480) |
|
2-318, gnl|Hg17|chr2 (70225269-70224966) |
|
2-318, gnl|Mm7|chr6 (86602192-86602488) |
| |
|
413-540, gnl|bosTau2|chr11 (44635179-44635305) |
|
413-540, gnl|canFam2|chr10 (71837918-71838818) |
|
413-540, gnl|dasNov1|scaffold_7109 (35853-36778) |
|
413-540, gnl|echTel1|scaffold_265147 (10387-11319) |
|
413-540, gnl|hg17|chr2 (70221846-70222785) |
|
413-540, gnl|Hg17|chr2 (70222471-70222341) |
|
413-540, gnl|mm7|chr6 (86607741-86606988) |
|
413-540, gnl|oryCun1|scaffold_210099 (60863-59921) |
|
413-540, gnl|panTro1|chr12 (72532980-72533919) |
|
413-540, gnl|rheMac2|chr13 (70361256-70362196) |
|
413-540, gnl|rn3|chr4 (120972125-120971373) |
