Ss1.1-Pig2-65F16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTATTGAAGTTAAAGGTTACTTTGGAGTTTCTTCTGCGGAAATGTGTAAGGTCAAATA CTATAGCTTTCACCTTATGTAGTACTTTAGAGGAAGAATTAGGGGCATGTTGCTGCGTTT CACTACAAAACCAGAATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGA AGACAGCTGTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTAC AGAACAGCCTGCAAGCTGAGGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGGACATC TGGAACGTTATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACATAGAG CTCAATGTGGCCCGCCTGGAGGCTGTGCTCTCTACTATTTTTTTACCAGCTCAACAAAAG GATGCCCACAACTCACCAAATCCAGGTGGAGCAGTCCATCAGCCTCCTGCTAAACTTCCT GCTGGCAGCCTTTGATCCGGAAGGCCATGGTAAAATTTCAGTATTTGCTGTCAAAATGGC TTTAGCCACGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTATTGAAGTTAAAGGTTACTTTGGAGTTTCTTCTGCGGAAATGTGTAAGGTCAAATA CTATAGCTTTCACCTTATGTAGTACTTTAGAGGAAGAATTAGGGGCATGTTGCTGCGTTT CACTACAAAACCAGAATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGA AGACAGCTGTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATCCGACTCTCCACCTAC AGAACAGCCTGCAAGCTGAGGTTTGTTCAGAAGAAATGCAATTTGCACCTGGTGGACATC TGGAACGTTATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACATAGAG CTCAATGTGGCCCGCCTGGAGGCTGTGCTCTCTACTATTTTTTTACCAGCTCAACAAAAG GATGCCCACAACTCACCAAATCCAGGTGGAGCAGTCCATCAGCCTCCTGCTAAACTTCCT GCTGGCAGCCTTTGATCCGGAAGGCCATGGTAAAATTTCAGTATTTGCTGTCAAAATGGC TTTAGCCACGTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 363-482, - strand, RNAz p=0.771851 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 363-482, - strand, RNAz p=0.771851 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 389-497, - strand, RNAmicro p=0.999919 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-134, gnl|bosTau2|chr24 (18376475-18376608) | |
| 1-134, gnl|canFam2|chr7 (58210723-58210017) | |
| 1-134, gnl|dasNov1|scaffold_74856 (6913-7578) | |
| 1-134, gnl|echTel1|scaffold_162746 (1869-2544) | |
| 1-134, gnl|galGal2|chr2 (106597561-106598237) | |
| 1-134, gnl|hg17|chr18 (30543815-30544469) | |
| 1-134, gnl|Hg17|chr18 (30544276-30544407) | |
| 1-134, gnl|loxAfr1|scaffold_4667 (71576-72253) | |
| 1-134, gnl|mm7|chr18 (23881773-23882430) | |
| 1-134, gnl|Mm7|chr18 (23882235-23882368) | |
| 1-134, gnl|monDom2|scaffold_4 (120438902-120438202) | |
| 1-134, gnl|panTro1|chr17 (26497501-26498155) | |
| 1-134, gnl|rheMac2|chr18 (27702518-27703178) | |
| 1-134, gnl|rn3|chr18 (15432381-15433047) | |
| 284-522, gnl|bosTau2|chr24 (18472148-18472385) | |
| 284-522, gnl|canFam2|chr7 (58142922-58142693) | |
| 284-522, gnl|danRer3|chr24 (30386254-30386479) | |
| 284-522, gnl|dasNov1|scaffold_179877 (381-589) | |
| 284-522, gnl|echTel1|scaffold_293111 (94443-94214) | |
| 284-522, gnl|fr1|chrUn (61308460-61308684) | |
| 284-522, gnl|galGal2|chr2 (106657707-106657947) | |
| 284-522, gnl|hg17|chr18 (30627997-30628226) | |
| 284-522, gnl|Hg17|chr18 (30627999-30628235) | |
| 284-522, gnl|loxAfr1|scaffold_1141 (75810-76039) | |
| 284-522, gnl|mm7|chr18 (23954225-23954454) | |
| 284-522, gnl|Mm7|chr18 (23954227-23954463) | |
| 284-522, gnl|monDom2|scaffold_4 (120350776-120350554) | |
| 284-522, gnl|oryCun1|scaffold_92059 (3603-3382) | |
| 284-522, gnl|panTro1|chr17 (26582345-26582574) | |
| 284-522, gnl|rheMac2|chr18 (27783997-27784226) | |
| 284-522, gnl|rn3|chr18 (15513393-15513622) | |
| 284-522, gnl|tetNig1|chr15_random (595568-595797) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-134, gnl|bosTau2|chr24 (18376475-18376608) | |
| 1-134, gnl|canFam2|chr7 (58210723-58210017) | |
| 1-134, gnl|dasNov1|scaffold_74856 (6913-7578) | |
| 1-134, gnl|echTel1|scaffold_162746 (1869-2544) | |
| 1-134, gnl|galGal2|chr2 (106597561-106598237) | |
| 1-134, gnl|hg17|chr18 (30543815-30544469) | |
| 1-134, gnl|Hg17|chr18 (30544276-30544407) | |
| 1-134, gnl|loxAfr1|scaffold_4667 (71576-72253) | |
| 1-134, gnl|mm7|chr18 (23881773-23882430) | |
| 1-134, gnl|Mm7|chr18 (23882235-23882368) | |
| 1-134, gnl|monDom2|scaffold_4 (120438902-120438202) | |
| 1-134, gnl|panTro1|chr17 (26497501-26498155) | |
| 1-134, gnl|rheMac2|chr18 (27702518-27703178) | |
| 1-134, gnl|rn3|chr18 (15432381-15433047) | |
| 284-522, gnl|bosTau2|chr24 (18472148-18472385) | |
| 284-522, gnl|canFam2|chr7 (58142922-58142693) | |
| 284-522, gnl|danRer3|chr24 (30386254-30386479) | |
| 284-522, gnl|dasNov1|scaffold_179877 (381-589) | |
| 284-522, gnl|echTel1|scaffold_293111 (94443-94214) | |
| 284-522, gnl|fr1|chrUn (61308460-61308684) | |
| 284-522, gnl|galGal2|chr2 (106657707-106657947) | |
| 284-522, gnl|hg17|chr18 (30627997-30628226) | |
| 284-522, gnl|Hg17|chr18 (30627999-30628235) | |
| 284-522, gnl|loxAfr1|scaffold_1141 (75810-76039) | |
| 284-522, gnl|mm7|chr18 (23954225-23954454) | |
| 284-522, gnl|Mm7|chr18 (23954227-23954463) | |
| 284-522, gnl|monDom2|scaffold_4 (120350776-120350554) | |
| 284-522, gnl|oryCun1|scaffold_92059 (3603-3382) | |
| 284-522, gnl|panTro1|chr17 (26582345-26582574) | |
| 284-522, gnl|rheMac2|chr18 (27783997-27784226) | |
| 284-522, gnl|rn3|chr18 (15513393-15513622) | |
| 284-522, gnl|tetNig1|chr15_random (595568-595797) |