Non-Coding RNA Search

Ss1.1-Pig2-66A20.5

Sequence:


               
               GTCTGTGTCTCGACTGTGCCAACATCCTGTTCTGGTGCGACATACAGTAATTCTGTGAGA
TGTTCCCGGGGGCGGGGTGGGGGGGGACCTGGGCANAGGACGCAGGGGACTCCTGTCATT
TCCTCCACCTCTATGTGGATCTGCAATTATTTCAAAATAAATGTTTGGTGTATAAAGGGA
GAAGGGATGGCGGGAGGGGAGGGGCCTGGGCTGGGGGCGTCAGGAGAGCTGTGCTGCCCA
CAGGCCTGCAGCACTACCAGGACCTGAGCGCCCTGATCCTGCGGTCAGAAGTGGAGGCCC
TGCAGCAGGTGGTGGAGGCAGCTGTGGGGCATGTCCTGCCGGGGGCCACCGTAACGCTGG
CCGGCGGCTTCCGGAGGGGTCCGGGAGACCACAGAGGCTGTGAGTCAGACTGGCCCCCTC
AGGGGGAAGTTGCAGGGCCACGACGTGGACTTCCTCATCACCCACCCCCAGGAGGGCCTG
GAGGCAGGGCTGCTGCCCAGCGTGATATGCTGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTGTGTCTCGACTGTGCCAACATCCTGTTCTGGTGCGACATACAGTAATTCTGTGAGA
TGTTCCCGGGGGCGGGGTGGGGGGGGACCTGGGCANAGGACGCAGGGGACTCCTGTCATT
TCCTCCACCTCTATGTGGATCTGCAATTATTTCAAAATAAATGTTTGGTGTATAAAGGGA
GAAGGGATGGCGGGAGGGGAGGGGCCTGGGCTGGGGGCGTCAGGAGAGCTGTGCTGCCCA
CAGGCCTGCAGCACTACCAGGACCTGAGCGCCCTGATCCTGCGGTCAGAAGTGGAGGCCC
TGCAGCAGGTGGTGGAGGCAGCTGTGGGGCATGTCCTGCCGGGGGCCACCGTAACGCTGG
CCGGCGGCTTCCGGAGGGGTCCGGGAGACCACAGAGGCTGTGAGTCAGACTGGCCCCCTC
AGGGGGAAGTTGCAGGGCCACGACGTGGACTTCCTCATCACCCACCCCCAGGAGGGCCTG
GAGGCAGGGCTGCTGCCCAGCGTGATATGCTGTCTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               165-277, - strand, RNAz p=0.894416

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               165-277, - strand, RNAz p=0.894416

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               97-377, gnl|bosTau2|chr4 (39034713-39034429)
               

               
               97-377, gnl|Hg17|chr7 (43887652-43887236)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               97-377, gnl|bosTau2|chr4 (39034713-39034429)
               

               
               97-377, gnl|Hg17|chr7 (43887652-43887236)

	97-377, gnl\|bosTau2\|chr4 (39034713-39034429)
	97-377, gnl\|Hg17\|chr7 (43887652-43887236)