Ss1.1-Pig2-66L05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCTCCCTCTGCTCTCCTGCCAACATGGGGGGCAGGTGCCCAGAGCCCAGACTGGGAAG AGCAACAGCGGGGACCCACTGCTTCCTGTAGAGACCTTCCATCCATCCCTACCTGCTACA GGGGCTCTGGGTTCTCTAATTCCTGAACTTTTGGGGACCCCTTTCAATTCTCCCCGCCGA CAGCCTCCGCTCTTTCCTAGACCTGGGCCTGTCCCCACACCTCACAGCGCTCATGGCAGG CGGGCAGCCCCTGGGGAACAGCAGCAGCACGGGGGACACCGGCTTCAGCTGCTCTCAGGA CTCAGGAACAGACGTGATGCTGCTCGAGGACTACACGTCTGACGACAACCCTCCCTCGCA CTGCACTTGCCCACCCAAGAGGAGGAGCTCGGTGACATTCGAGGATGAAGTGGAACAAGT CAAAGAAGCTGCCAGGAACCCTATTCTTCATGTGCGAGCCGACGTGCATAAGTCCTTGGA CAGTTACGCAGCCAGCCTGGCCAAAGCCATCGAGGCTGAAGCCAAAATCAACTTATTTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCTCCCTCTGCTCTCCTGCCAACATGGGGGGCAGGTGCCCAGAGCCCAGACTGGGAAG AGCAACAGCGGGGACCCACTGCTTCCTGTAGAGACCTTCCATCCATCCCTACCTGCTACA GGGGCTCTGGGTTCTCTAATTCCTGAACTTTTGGGGACCCCTTTCAATTCTCCCCGCCGA CAGCCTCCGCTCTTTCCTAGACCTGGGCCTGTCCCCACACCTCACAGCGCTCATGGCAGG CGGGCAGCCCCTGGGGAACAGCAGCAGCACGGGGGACACCGGCTTCAGCTGCTCTCAGGA CTCAGGAACAGACGTGATGCTGCTCGAGGACTACACGTCTGACGACAACCCTCCCTCGCA CTGCACTTGCCCACCCAAGAGGAGGAGCTCGGTGACATTCGAGGATGAAGTGGAACAAGT CAAAGAAGCTGCCAGGAACCCTATTCTTCATGTGCGAGCCGACGTGCATAAGTCCTTGGA CAGTTACGCAGCCAGCCTGGCCAAAGCCATCGAGGCTGAAGCCAAAATCAACTTATTTGG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 424-540, - strand, RNAz p=0.9672 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 424-540, - strand, RNAz p=0.9672 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 192-306, gnl|bosTau2|chr3 (868342-868229) | |
| 192-306, gnl|canFam2|chr7 (33368697-33368576) | |
| 192-306, gnl|danRer3|chr9 (30984825-30984701) | |
| 192-306, gnl|echTel1|scaffold_99579 (8115-8236) | |
| 192-306, gnl|fr1|chrUn (203874297-203874173) | |
| 192-306, gnl|galGal2|chr1 (78212847-78212731) | |
| 192-306, gnl|hg17|chr1 (164791457-164791578) | |
| 192-306, gnl|Hg17|chr1 (164791572-164791459) | |
| 192-306, gnl|loxAfr1|scaffold_37414 (4937-5058) | |
| 192-306, gnl|mm7|chr1 (165288249-165288128) | |
| 192-306, gnl|Mm7|chr1 (165288132-165288245) | |
| 192-306, gnl|monDom2|scaffold_16 (18970482-18970603) | |
| 192-306, gnl|oryCun1|scaffold_199963 (21251-21130) | |
| 192-306, gnl|panTro1|chr1 (147047147-147047268) | |
| 192-306, gnl|rheMac2|chr1 (197820228-197820349) | |
| 192-306, gnl|rn3|chr13 (81083224-81083103) | |
| 192-306, gnl|tetNig1|chr2 (9287438-9287561) | |
| 192-306, gnl|xenTro1|scaffold_143 (1500905-1501017) | |
| 424-540, gnl|bosTau2|chr3 (863445-863329) | |
| 424-540, gnl|canFam2|chr7 (33372916-33372660) | |
| 424-540, gnl|danRer3|chr9 (30991633-30991410) | |
| 424-540, gnl|dasNov1|scaffold_15231 (85995-85739) | |
| 424-540, gnl|echTel1|scaffold_99579 (3922-4178) | |
| 424-540, gnl|fr1|chrUn (203875242-203875015) | |
| 424-540, gnl|galGal2|chr1 (78217173-78216940) | |
| 424-540, gnl|hg17|chr1 (164786423-164786679) | |
| 424-540, gnl|Hg17|chr1 (164786694-164786578) | |
| 424-540, gnl|loxAfr1|scaffold_50828 (5932-6186) | |
| 424-540, gnl|mm7|chr1 (165292607-165292351) | |
| 424-540, gnl|Mm7|chr1 (165292334-165292450) | |
| 424-540, gnl|monDom2|scaffold_16 (18963878-18964134) | |
| 424-540, gnl|oryCun1|scaffold_199963 (24854-24598) | |
| 424-540, gnl|panTro1|chr1 (147042099-147042359) | |
| 424-540, gnl|rheMac2|chr1 (197815169-197815425) | |
| 424-540, gnl|rn3|chr13 (81089090-81088834) | |
| 424-540, gnl|tetNig1|chr2 (9286729-9286960) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 192-306, gnl|bosTau2|chr3 (868342-868229) | |
| 192-306, gnl|canFam2|chr7 (33368697-33368576) | |
| 192-306, gnl|danRer3|chr9 (30984825-30984701) | |
| 192-306, gnl|echTel1|scaffold_99579 (8115-8236) | |
| 192-306, gnl|fr1|chrUn (203874297-203874173) | |
| 192-306, gnl|galGal2|chr1 (78212847-78212731) | |
| 192-306, gnl|hg17|chr1 (164791457-164791578) | |
| 192-306, gnl|Hg17|chr1 (164791572-164791459) | |
| 192-306, gnl|loxAfr1|scaffold_37414 (4937-5058) | |
| 192-306, gnl|mm7|chr1 (165288249-165288128) | |
| 192-306, gnl|Mm7|chr1 (165288132-165288245) | |
| 192-306, gnl|monDom2|scaffold_16 (18970482-18970603) | |
| 192-306, gnl|oryCun1|scaffold_199963 (21251-21130) | |
| 192-306, gnl|panTro1|chr1 (147047147-147047268) | |
| 192-306, gnl|rheMac2|chr1 (197820228-197820349) | |
| 192-306, gnl|rn3|chr13 (81083224-81083103) | |
| 192-306, gnl|tetNig1|chr2 (9287438-9287561) | |
| 192-306, gnl|xenTro1|scaffold_143 (1500905-1501017) | |
| 424-540, gnl|bosTau2|chr3 (863445-863329) | |
| 424-540, gnl|canFam2|chr7 (33372916-33372660) | |
| 424-540, gnl|danRer3|chr9 (30991633-30991410) | |
| 424-540, gnl|dasNov1|scaffold_15231 (85995-85739) | |
| 424-540, gnl|echTel1|scaffold_99579 (3922-4178) | |
| 424-540, gnl|fr1|chrUn (203875242-203875015) | |
| 424-540, gnl|galGal2|chr1 (78217173-78216940) | |
| 424-540, gnl|hg17|chr1 (164786423-164786679) | |
| 424-540, gnl|Hg17|chr1 (164786694-164786578) | |
| 424-540, gnl|loxAfr1|scaffold_50828 (5932-6186) | |
| 424-540, gnl|mm7|chr1 (165292607-165292351) | |
| 424-540, gnl|Mm7|chr1 (165292334-165292450) | |
| 424-540, gnl|monDom2|scaffold_16 (18963878-18964134) | |
| 424-540, gnl|oryCun1|scaffold_199963 (24854-24598) | |
| 424-540, gnl|panTro1|chr1 (147042099-147042359) | |
| 424-540, gnl|rheMac2|chr1 (197815169-197815425) | |
| 424-540, gnl|rn3|chr13 (81089090-81088834) | |
| 424-540, gnl|tetNig1|chr2 (9286729-9286960) |