Ss1.1-Pig2-66L09.5
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GCGCTGGGAGAACATAGATGACTGGACACAGAATCTAGAGACTTCAGATGATATGGAGAT
GTTTCGACGTTCAGGTCCGTGGAGCTGGCGGGGTCGCAGGCCCTGAGCCAGCAGGCTGAG
CTGATTTCTCGGCAGCTGCAAGAGCTGCGGCGGCTCGAGGAGGAGGTCCGGGTGCTGCGG
GAGACCTCGCTGCAGCAGAAGATGAGGCTGGAGTCCCAGGCCATGGAGCTGGAGGCGCTG
GCACGGGCGGAGAAGGCCGGCCGTGCTGAGGCCGAGGGCCTGCGTGCTGCCCTGGCCGGG
GCTGAGGTTGTCCGGAAGAACCTGGAAGAGGGGAGCCAGCGGGAGCTGGAGGAGGTTCAG
AGGCTGCACCAAGAGGAGCTCTCCTCCTTGACACAGGCTCACCAGGAGGCTCTTTCCAGT
TTGACTCACAAGGCTGGGGGCCTGGAGAAATCTCTGAGTAGTCTGGAAACCAGGAGGTCA
GAGGAAGCCAAGGAGCTGGCTGCGGCCCAGAGGGAGGCTGAGCTGCTGCGGCAGCAGTTG
AGCCTCCAAGGCCTCTTGGGTCTT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGCTGGGAGAACATAGATGACTGGACACAGAATCTAGAGACTTCAGATGATATGGAGAT
GTTTCGACGTTCAGGTCCGTGGAGCTGGCGGGGTCGCAGGCCCTGAGCCAGCAGGCTGAG
CTGATTTCTCGGCAGCTGCAAGAGCTGCGGCGGCTCGAGGAGGAGGTCCGGGTGCTGCGG
GAGACCTCGCTGCAGCAGAAGATGAGGCTGGAGTCCCAGGCCATGGAGCTGGAGGCGCTG
GCACGGGCGGAGAAGGCCGGCCGTGCTGAGGCCGAGGGCCTGCGTGCTGCCCTGGCCGGG
GCTGAGGTTGTCCGGAAGAACCTGGAAGAGGGGAGCCAGCGGGAGCTGGAGGAGGTTCAG
AGGCTGCACCAAGAGGAGCTCTCCTCCTTGACACAGGCTCACCAGGAGGCTCTTTCCAGT
TTGACTCACAAGGCTGGGGGCCTGGAGAAATCTCTGAGTAGTCTGGAAACCAGGAGGTCA
GAGGAAGCCAAGGAGCTGGCTGCGGCCCAGAGGGAGGCTGAGCTGCTGCGGCAGCAGTTG
AGCCTCCAAGGCCTCTTGGGTCTT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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224-314, + strand, RNAmicro p=0.946892 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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224-314, + strand, RNAmicro p=0.946892 |
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73-374, gnl|bosTau2|chr23 (20491819-20492120) |
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73-374, gnl|Hg17|chr6 (31230557-31230256) |
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73-374, gnl|Mm7|chr17 (33622974-33623275) |
| |
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377-542, gnl|bosTau2|chr23 (20494442-20494607) |
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377-542, gnl|canFam2|chr12 (3852535-3852944) |
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377-542, gnl|hg17|chr6 (31226489-31226893) |
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377-542, gnl|Hg17|chr6 (31226880-31226715) |
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377-542, gnl|loxAfr1|scaffold_20189 (34894-34480) |
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377-542, gnl|mm7|chr17 (33626837-33626443) |
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377-542, gnl|Mm7|chr17 (33626453-33626618) |
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377-542, gnl|monDom2|scaffold_42 (18163916-18163499) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
73-374, gnl|bosTau2|chr23 (20491819-20492120) |
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73-374, gnl|Hg17|chr6 (31230557-31230256) |
|
73-374, gnl|Mm7|chr17 (33622974-33623275) |
| |
|
377-542, gnl|bosTau2|chr23 (20494442-20494607) |
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377-542, gnl|canFam2|chr12 (3852535-3852944) |
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377-542, gnl|hg17|chr6 (31226489-31226893) |
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377-542, gnl|Hg17|chr6 (31226880-31226715) |
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377-542, gnl|loxAfr1|scaffold_20189 (34894-34480) |
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377-542, gnl|mm7|chr17 (33626837-33626443) |
|
377-542, gnl|Mm7|chr17 (33626453-33626618) |
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377-542, gnl|monDom2|scaffold_42 (18163916-18163499) |
