Ss1.1-Pig2-67E08.5
|
ACTTGGCTTGGAAGCTGACAAGTGGGGCTTTGGTGCCACAGTCTGGGAGGTGTTCAGCGG
TGTCATGATGCCCATCAGCACTCTGGATCCTGCCAAGAAGCTACAGTTTTACCAGGAACG
GCAACAGCTCCCTGCCCCCAAGTGGATGGAGCTGGCCCTGCTGATCCAGCAGTGCATGGC
CTACGAGCCAGGCCAGAGGCCTTCCTTCCGTGCTGTCATCCGTGACCTGAACAGCCTCAT
CACTTCAGATTATGAACTCCTCTCAGACCCCACGCCTGGTGCCCTAGCACCCCGTGACGG
GCTTTGGAATGGCGCCCAGCTCTATGCCTGCCAGGACCCTACCATCTTTGAGGAGAGACA
CCTCAAGTACATCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGAACTCTGCCGCTA
CGACCCACTGGGCGACAACACAGGTGCTCTGGTGGCCGTGAAGCAGCTGCAGCACAGTGG
CCCAGAACAGCAGAGGGACTTCCAGCGGGAGATCCAGATCCTTAAAGCCCTCCACAGCGA
CTTCATTGTCAAGTACCGGGGTGTCAGCTATGGCCCAGGCCGCCAGAGTCTGCGGCTGGT
CATGGAATATCTGCCAAGCGGCTGCCTGCGGGACTTCCTGCAGAGGCACCGCGCGCGCCT
AGATGCTGGCCGCCTGCTCCTCTACGCCTCGCAAATCTGCAAGGGCATGGAGTACCTGGG
CTCCCGCCGCTGCGTGCACCGCGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTTGGCTTGGAAGCTGACAAGTGGGGCTTTGGTGCCACAGTCTGGGAGGTGTTCAGCGG
TGTCATGATGCCCATCAGCACTCTGGATCCTGCCAAGAAGCTACAGTTTTACCAGGAACG
GCAACAGCTCCCTGCCCCCAAGTGGATGGAGCTGGCCCTGCTGATCCAGCAGTGCATGGC
CTACGAGCCAGGCCAGAGGCCTTCCTTCCGTGCTGTCATCCGTGACCTGAACAGCCTCAT
CACTTCAGATTATGAACTCCTCTCAGACCCCACGCCTGGTGCCCTAGCACCCCGTGACGG
GCTTTGGAATGGCGCCCAGCTCTATGCCTGCCAGGACCCTACCATCTTTGAGGAGAGACA
CCTCAAGTACATCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGAACTCTGCCGCTA
CGACCCACTGGGCGACAACACAGGTGCTCTGGTGGCCGTGAAGCAGCTGCAGCACAGTGG
CCCAGAACAGCAGAGGGACTTCCAGCGGGAGATCCAGATCCTTAAAGCCCTCCACAGCGA
CTTCATTGTCAAGTACCGGGGTGTCAGCTATGGCCCAGGCCGCCAGAGTCTGCGGCTGGT
CATGGAATATCTGCCAAGCGGCTGCCTGCGGGACTTCCTGCAGAGGCACCGCGCGCGCCT
AGATGCTGGCCGCCTGCTCCTCTACGCCTCGCAAATCTGCAAGGGCATGGAGTACCTGGG
CTCCCGCCGCTGCGTGCACCGCGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
87-248, gnl|bosTau2|chr7 (4572780-4572943) |
|
87-248, gnl|canFam2|chr20 (48063883-48063777) |
|
87-248, gnl|danRer3|chr8 (6087288-6087182) |
|
87-248, gnl|dasNov1|scaffold_10163 (28205-28099) |
|
87-248, gnl|echTel1|scaffold_105142 (4375-4269) |
|
87-248, gnl|fr1|chrUn (257620141-257620035) |
|
87-248, gnl|galGal2|chrUn (25172262-25172368) |
|
87-248, gnl|hg17|chr19 (17806379-17806485) |
|
87-248, gnl|Hg17|chr19 (17806543-17806380) |
|
87-248, gnl|loxAfr1|scaffold_9200 (23913-23807) |
|
87-248, gnl|mm7|chr8 (70152181-70152075) |
|
87-248, gnl|Mm7|chr8 (70152003-70152178) |
|
87-248, gnl|monDom2|scaffold_209 (613829-613935) |
|
87-248, gnl|oryCun1|scaffold_121567 (485-379) |
|
87-248, gnl|rheMac2|chr19 (17401320-17401426) |
|
87-248, gnl|rn3|chr16 (18885247-18885141) |
|
87-248, gnl|tetNig1|chr1 (14549875-14549769) |
|
87-248, gnl|xenTro1|scaffold_1217 (228793-228899) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
87-248, gnl|bosTau2|chr7 (4572780-4572943) |
|
87-248, gnl|canFam2|chr20 (48063883-48063777) |
|
87-248, gnl|danRer3|chr8 (6087288-6087182) |
|
87-248, gnl|dasNov1|scaffold_10163 (28205-28099) |
|
87-248, gnl|echTel1|scaffold_105142 (4375-4269) |
|
87-248, gnl|fr1|chrUn (257620141-257620035) |
|
87-248, gnl|galGal2|chrUn (25172262-25172368) |
|
87-248, gnl|hg17|chr19 (17806379-17806485) |
|
87-248, gnl|Hg17|chr19 (17806543-17806380) |
|
87-248, gnl|loxAfr1|scaffold_9200 (23913-23807) |
|
87-248, gnl|mm7|chr8 (70152181-70152075) |
|
87-248, gnl|Mm7|chr8 (70152003-70152178) |
|
87-248, gnl|monDom2|scaffold_209 (613829-613935) |
|
87-248, gnl|oryCun1|scaffold_121567 (485-379) |
|
87-248, gnl|rheMac2|chr19 (17401320-17401426) |
|
87-248, gnl|rn3|chr16 (18885247-18885141) |
|
87-248, gnl|tetNig1|chr1 (14549875-14549769) |
|
87-248, gnl|xenTro1|scaffold_1217 (228793-228899) |
