Non-Coding RNA Search

Ss1.1-Pig2-68J03.5

Sequence:


               
               GCACAGTGAAGGAGGTGGAGGTGCCACAGGCTGCCCTGGGCACCCCAGCTCCTGGGACGG
GGACCAGTGGCCACTCGCCTGTGGTCGAGGAGGAGGGGGGCACCCCCGCGCCGGCACCAG
GGCTCCTGCAGGTCACGGAGAGGCGGCAGCCCCTGAGCAGTGTCTCCTCCCTGGAGGTGC
ACTTCGACCTCCTGGACCTCACCGAGCTCACCGACATGTCCGACCAGGAGCTGGCCGAGG
TCTTCGCCGACTCTGACGACGAGAACCTGACCAGCGACTCGCCCACAGGCCTCCACCCGC
TGCCCAGGGCCGGCTGTCTGCGCTCCCCTTCTTGGACACGCACCAGGGCAGAGCAGAAGC
GGGAGAAGCAGCCTCTGGGCGACCCGGAGCGGCAGCCTGCCGTTGCAGACACGTTTCTGA
CCGTGGAGAGGCCCAAAGAGGACTAGGCCAGCTGGCCGCAGGGCCGAGGCCCCTGGACAC
TGCCCACCCCGTGTGGATCCAGGCTGGGGCCTCAGGGCACCTCAGCAGCAGCTTGGCCCC
GTGGCCTTACGTCCAGCCCCTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACAGTGAAGGAGGTGGAGGTGCCACAGGCTGCCCTGGGCACCCCAGCTCCTGGGACGG
GGACCAGTGGCCACTCGCCTGTGGTCGAGGAGGAGGGGGGCACCCCCGCGCCGGCACCAG
GGCTCCTGCAGGTCACGGAGAGGCGGCAGCCCCTGAGCAGTGTCTCCTCCCTGGAGGTGC
ACTTCGACCTCCTGGACCTCACCGAGCTCACCGACATGTCCGACCAGGAGCTGGCCGAGG
TCTTCGCCGACTCTGACGACGAGAACCTGACCAGCGACTCGCCCACAGGCCTCCACCCGC
TGCCCAGGGCCGGCTGTCTGCGCTCCCCTTCTTGGACACGCACCAGGGCAGAGCAGAAGC
GGGAGAAGCAGCCTCTGGGCGACCCGGAGCGGCAGCCTGCCGTTGCAGACACGTTTCTGA
CCGTGGAGAGGCCCAAAGAGGACTAGGCCAGCTGGCCGCAGGGCCGAGGCCCCTGGACAC
TGCCCACCCCGTGTGGATCCAGGCTGGGGCCTCAGGGCACCTCAGCAGCAGCTTGGCCCC
GTGGCCTTACGTCCAGCCCCTTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12653823|gb|AAH00700.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12653823|gb|AAH00700.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               5-147, gnl|bosTau2|chr18 (15993478-15993336)
               

               
               5-147, gnl|Hg17|chr16 (88603335-88603193)
               

               
               5-147, gnl|Mm7|chr8 (122150433-122150285)
               


               
               267-468, gnl|bosTau2|chr18 (15992576-15992373)
               

               
               267-468, gnl|Hg17|chr16 (88600429-88600213)
               

               
               267-468, gnl|Mm7|chr8 (122147307-122147099)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-147, gnl|bosTau2|chr18 (15993478-15993336)
               

               
               5-147, gnl|Hg17|chr16 (88603335-88603193)
               

               
               5-147, gnl|Mm7|chr8 (122150433-122150285)
               


               
               267-468, gnl|bosTau2|chr18 (15992576-15992373)
               

               
               267-468, gnl|Hg17|chr16 (88600429-88600213)
               

               
               267-468, gnl|Mm7|chr8 (122147307-122147099)

	5-147, gnl\|bosTau2\|chr18 (15993478-15993336)
	5-147, gnl\|Hg17\|chr16 (88603335-88603193)
	5-147, gnl\|Mm7\|chr8 (122150433-122150285)

	267-468, gnl\|bosTau2\|chr18 (15992576-15992373)
	267-468, gnl\|Hg17\|chr16 (88600429-88600213)
	267-468, gnl\|Mm7\|chr8 (122147307-122147099)