Ss1.1-Pig2-71K15.5
|
AGAGAACAACACTGCCCGAAGTGAGTCTCCTGGGAGAATGGATGATCCTAAGCAACCCAG
CTCACAGGTAGAAGAGTCTGCAATGATGGGAGTAAGTGGCTATGTGGAGTATCTCCGAGA
GCAGGAAGTTCTGAGCGGTGGTTCCGGTACAACCCTCGTCTCACCTGCATCTACTGCGCC
AAATCTTTCAATCAGAAGGGAAGCCTGGACCGCCACATGCGCCTGCACATGGGAATCACA
CCATTCGTCTGCCGCATGTGTGGCAAGAAGTATACCCGGAAGGATCAGCTGGAGTATCAC
ATCCGCAAGCACACAGGCAACAAACCTTTTCACTGTCATGTTTGTGGCAAAAGTTTCCCC
TTCCAGGCCATCTTGAATCAGCACTTTCGCAAAAACCACCCTGGCTGTATACCCCTGGAG
GGACCTCATAGCATCTCCCCTGAAACAACTGTCACGTCTCGAGGACAGGCCGAGGAAGAG
TCTCCTTCTCAAGAAGAGACAGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGAGAACAACACTGCCCGAAGTGAGTCTCCTGGGAGAATGGATGATCCTAAGCAACCCAG
CTCACAGGTAGAAGAGTCTGCAATGATGGGAGTAAGTGGCTATGTGGAGTATCTCCGAGA
GCAGGAAGTTCTGAGCGGTGGTTCCGGTACAACCCTCGTCTCACCTGCATCTACTGCGCC
AAATCTTTCAATCAGAAGGGAAGCCTGGACCGCCACATGCGCCTGCACATGGGAATCACA
CCATTCGTCTGCCGCATGTGTGGCAAGAAGTATACCCGGAAGGATCAGCTGGAGTATCAC
ATCCGCAAGCACACAGGCAACAAACCTTTTCACTGTCATGTTTGTGGCAAAAGTTTCCCC
TTCCAGGCCATCTTGAATCAGCACTTTCGCAAAAACCACCCTGGCTGTATACCCCTGGAG
GGACCTCATAGCATCTCCCCTGAAACAACTGTCACGTCTCGAGGACAGGCCGAGGAAGAG
TCTCCTTCTCAAGAAGAGACAGTT
|
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gi|61873992|ref|XP_596267.1| |
Protein identifier
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gi|61873992|ref|XP_596267.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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64-504, gnl|bosTau2|chr21 (47559113-47559554) |
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64-504, gnl|canFam2|chr7 (28317051-28316531) |
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64-504, gnl|danRer3|chr22 (14594806-14595355) |
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64-504, gnl|dasNov1|scaffold_65707 (1880-2403) |
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64-504, gnl|echTel1|scaffold_310330 (35930-36451) |
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64-504, gnl|fr1|chrUn (214217243-214216711) |
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64-504, gnl|galGal2|chr8 (7408555-7408021) |
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64-504, gnl|hg17|chr1 (170586400-170586924) |
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64-504, gnl|Hg17|chr1 (170586427-170586868) |
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64-504, gnl|loxAfr1|scaffold_2306 (5892-6416) |
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64-504, gnl|mm7|chr1 (160982618-160982105) |
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64-504, gnl|Mm7|chr1 (160982596-160982159) |
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64-504, gnl|monDom2|scaffold_16 (25208518-25209044) |
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64-504, gnl|oryCun1|scaffold_185041 (7218-6694) |
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64-504, gnl|panTro1|chr1 (152957957-152958481) |
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64-504, gnl|rheMac2|chr1 (203525927-203526451) |
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64-504, gnl|rn3|chr13 (76594314-76593796) |
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64-504, gnl|tetNig1|chrUn_random (6035324-6034797) |
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64-504, gnl|xenTro1|scaffold_197 (1573664-1573102) |
| |
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139-405, gnl|bosTau2|chr11 (75077066-75076800) |
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139-405, gnl|Hg17|chr9 (126722337-126722603) |
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139-405, gnl|Mm7|chr2 (33418692-33418426) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
64-504, gnl|bosTau2|chr21 (47559113-47559554) |
|
64-504, gnl|canFam2|chr7 (28317051-28316531) |
|
64-504, gnl|danRer3|chr22 (14594806-14595355) |
|
64-504, gnl|dasNov1|scaffold_65707 (1880-2403) |
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64-504, gnl|echTel1|scaffold_310330 (35930-36451) |
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64-504, gnl|fr1|chrUn (214217243-214216711) |
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64-504, gnl|galGal2|chr8 (7408555-7408021) |
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64-504, gnl|hg17|chr1 (170586400-170586924) |
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64-504, gnl|Hg17|chr1 (170586427-170586868) |
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64-504, gnl|loxAfr1|scaffold_2306 (5892-6416) |
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64-504, gnl|mm7|chr1 (160982618-160982105) |
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64-504, gnl|Mm7|chr1 (160982596-160982159) |
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64-504, gnl|monDom2|scaffold_16 (25208518-25209044) |
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64-504, gnl|oryCun1|scaffold_185041 (7218-6694) |
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64-504, gnl|panTro1|chr1 (152957957-152958481) |
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64-504, gnl|rheMac2|chr1 (203525927-203526451) |
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64-504, gnl|rn3|chr13 (76594314-76593796) |
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64-504, gnl|tetNig1|chrUn_random (6035324-6034797) |
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64-504, gnl|xenTro1|scaffold_197 (1573664-1573102) |
| |
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139-405, gnl|bosTau2|chr11 (75077066-75076800) |
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139-405, gnl|Hg17|chr9 (126722337-126722603) |
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139-405, gnl|Mm7|chr2 (33418692-33418426) |
