Ss1.1-Pig2-74A17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGCTTGTGACCGGCTGAAGCTGGAGCGCAAGCAGCGGCGCATGTGCCGCCGGGACCCT GGTGTGGCTGAGACGCTGGTGGAGGCAGTCAGCATGAGTGCTCTTGAGTGCCAGTACCAG TTCCGGTTTGAACGCTGGAACTGCACCTTGGAGGGCCGCTACCGGGCCAGCCTGCTTAAG CGAGGCTTCAAGGAGACAGCCTTCCTCTACGCCATCTCCTCAGCTGGCCTGACACATGCA CTGGCCAAGGCATGCAGTGCAGGCCGCATGGAACGCTGCACTTGCGATGAGGCCCCTGAC CTGGAGAACCGAGAGGCCTGGCAGTGGGGTGGCTGTGGGGATAATCTCAAGTACAGCAGC AAGTTTGTAAAGGAGTTCCTGGGTCGGCGGTCTAGCAAGGATCTGCGAGCCCGTGTGGAC TTCCATAACAACCTCGTGGGTGTGAAGGTGATCAAAGCTGGGGTGGAGACCACGTGCAAG TGTCATGGGTGTGTCGGGCTCATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGCTTGTGACCGGCTGAAGCTGGAGCGCAAGCAGCGGCGCATGTGCCGCCGGGACCCT GGTGTGGCTGAGACGCTGGTGGAGGCAGTCAGCATGAGTGCTCTTGAGTGCCAGTACCAG TTCCGGTTTGAACGCTGGAACTGCACCTTGGAGGGCCGCTACCGGGCCAGCCTGCTTAAG CGAGGCTTCAAGGAGACAGCCTTCCTCTACGCCATCTCCTCAGCTGGCCTGACACATGCA CTGGCCAAGGCATGCAGTGCAGGCCGCATGGAACGCTGCACTTGCGATGAGGCCCCTGAC CTGGAGAACCGAGAGGCCTGGCAGTGGGGTGGCTGTGGGGATAATCTCAAGTACAGCAGC AAGTTTGTAAAGGAGTTCCTGGGTCGGCGGTCTAGCAAGGATCTGCGAGCCCGTGTGGAC TTCCATAACAACCTCGTGGGTGTGAAGGTGATCAAAGCTGGGGTGGAGACCACGTGCAAG TGTCATGGGTGTGTCGGGCTCATG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 222-341, + strand, RNAz p=0.828695 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 222-341, + strand, RNAz p=0.828695 |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 7-155, gnl|bosTau2|chr19 (41408909-41409057) | |
| 7-155, gnl|canFam2|chr9 (13243964-13243672) | |
| 7-155, gnl|echTel1|scaffold_260753 (3273-3561) | |
| 7-155, gnl|fr1|chrUn (22667022-22667303) | |
| 7-155, gnl|galGal2|chr27 (1783230-1782940) | |
| 7-155, gnl|hg17|chr17 (23607528-23607852) | |
| 7-155, gnl|Hg17|chr17 (42304967-42305115) | |
| 7-155, gnl|mm7|chr11 (103842655-103842945) | |
| 7-155, gnl|Mm7|chr11 (103842835-103842687) | |
| 7-155, gnl|monDom2|scaffold_18 (40477120-40476836) | |
| 7-155, gnl|panTro1|chr19 (26932063-26932387) | |
| 7-155, gnl|rheMac2|chr16 (23420480-23420788) | |
| 7-155, gnl|rn3|chr10 (92900745-92901034) | |
| 7-155, gnl|tetNig1|chr3 (12307308-12307586) | |
| 7-155, gnl|xenTro1|scaffold_58 (853829-853543) | |
| 183-451, gnl|bosTau2|chr19 (41409630-41409901) | |
| 183-451, gnl|canFam2|chr9 (13245371-13245535) | |
| 183-451, gnl|danRer3|chr3 (33486084-33486248) | |
| 183-451, gnl|dasNov1|scaffold_46641 (12724-12888) | |
| 183-451, gnl|echTel1|scaffold_260753 (2232-2068) | |
| 183-451, gnl|fr1|chrUn (126376855-126377019) | |
| 183-451, gnl|galGal2|chr27 (1787300-1787464) | |
| 183-451, gnl|hg17|chr17 (42307464-42307628) | |
| 183-451, gnl|Hg17|chr17 (42307464-42307735) | |
| 183-451, gnl|loxAfr1|scaffold_34980 (7386-7550) | |
| 183-451, gnl|mm7|chr11 (103841280-103841116) | |
| 183-451, gnl|Mm7|chr11 (103841278-103841007) | |
| 183-451, gnl|monDom2|scaffold_18 (40479146-40479310) | |
| 183-451, gnl|oryCun1|scaffold_202131 (4858-5021) | |
| 183-451, gnl|panTro1|chr19 (62816779-62816615) | |
| 183-451, gnl|rheMac2|chr16 (55950769-55950605) | |
| 183-451, gnl|rn3|chr10 (92899386-92899222) | |
| 183-451, gnl|tetNig1|chr15_random (1074303-1074467) | |
| 183-451, gnl|xenTro1|scaffold_58 (854067-854231) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-155, gnl|bosTau2|chr19 (41408909-41409057) | |
| 7-155, gnl|canFam2|chr9 (13243964-13243672) | |
| 7-155, gnl|echTel1|scaffold_260753 (3273-3561) | |
| 7-155, gnl|fr1|chrUn (22667022-22667303) | |
| 7-155, gnl|galGal2|chr27 (1783230-1782940) | |
| 7-155, gnl|hg17|chr17 (23607528-23607852) | |
| 7-155, gnl|Hg17|chr17 (42304967-42305115) | |
| 7-155, gnl|mm7|chr11 (103842655-103842945) | |
| 7-155, gnl|Mm7|chr11 (103842835-103842687) | |
| 7-155, gnl|monDom2|scaffold_18 (40477120-40476836) | |
| 7-155, gnl|panTro1|chr19 (26932063-26932387) | |
| 7-155, gnl|rheMac2|chr16 (23420480-23420788) | |
| 7-155, gnl|rn3|chr10 (92900745-92901034) | |
| 7-155, gnl|tetNig1|chr3 (12307308-12307586) | |
| 7-155, gnl|xenTro1|scaffold_58 (853829-853543) | |
| 183-451, gnl|bosTau2|chr19 (41409630-41409901) | |
| 183-451, gnl|canFam2|chr9 (13245371-13245535) | |
| 183-451, gnl|danRer3|chr3 (33486084-33486248) | |
| 183-451, gnl|dasNov1|scaffold_46641 (12724-12888) | |
| 183-451, gnl|echTel1|scaffold_260753 (2232-2068) | |
| 183-451, gnl|fr1|chrUn (126376855-126377019) | |
| 183-451, gnl|galGal2|chr27 (1787300-1787464) | |
| 183-451, gnl|hg17|chr17 (42307464-42307628) | |
| 183-451, gnl|Hg17|chr17 (42307464-42307735) | |
| 183-451, gnl|loxAfr1|scaffold_34980 (7386-7550) | |
| 183-451, gnl|mm7|chr11 (103841280-103841116) | |
| 183-451, gnl|Mm7|chr11 (103841278-103841007) | |
| 183-451, gnl|monDom2|scaffold_18 (40479146-40479310) | |
| 183-451, gnl|oryCun1|scaffold_202131 (4858-5021) | |
| 183-451, gnl|panTro1|chr19 (62816779-62816615) | |
| 183-451, gnl|rheMac2|chr16 (55950769-55950605) | |
| 183-451, gnl|rn3|chr10 (92899386-92899222) | |
| 183-451, gnl|tetNig1|chr15_random (1074303-1074467) | |
| 183-451, gnl|xenTro1|scaffold_58 (854067-854231) |