Ss1.1-Pig2-77O09.5
|
GTGGGTCTCTGCGTGAGGATGGAGAGCTCCAGGGCCCAGCCGTCTGCTAGCCCTGCCCAG
GAGGCTCCCGAGAACTGTGGAACCCTGTGCCCTCGAGACTTCCAGAGCAGCCCCGTGTGT
CACAGAGCGGCCCGCGAGGCTTCCGTCTTTGCTTGGCTGAGCGCAGATGAGGATGCTGCA
GACATGTTTAACCCTCATGTGTTAGATTCTCCAGCCGTGATTTTCGACAATGGTTCCGGG
CTCTGCAAGGCGGGGCTGTCTGGAGAGATCGGTCCCCGCCACGTGGTCAGCTCTGTCGTG
GGGCACCCCAAGTTCAAGATGCCTTCGACGGGAGCCAATCAGAAGAAGTACTTTGTGGGG
GAAGAGGCCCTGCACAGGTACGAGGTCTTGCACCTGCACTACCCCATTGAGCGGGGCCTG
ATCACGGGCTGGGATGACATGGAGAAGCTTTGGAAGCACCTCTTCGAGTGGGAGCTGGGG
GTCAAGGCCAGCGACCGGCCGGTGCTCATGACCGAGCCCTCGCTGAACCCCAGGGAGACC
CGCGAGAAGATGGCCGAAGTCATGTTCGAGGGCTTTGCCGTGCCCGCCTTCTACCTGTCG
GACCAGGCGGTGCTGGCCCTCTACGCCTCGGCCTGCGTCACGGGCCTGGTGGTGGACAGC
GGGGACGGGGTCACCTGCACCGTCCCCATCTTCGAGGGCTACTCCCTGCCCCACGCCGTC
ACCAAGCTCTACGTGGCGGGGAGGGACATCACGGAGCACCTCACGCGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTGGGTCTCTGCGTGAGGATGGAGAGCTCCAGGGCCCAGCCGTCTGCTAGCCCTGCCCAG
GAGGCTCCCGAGAACTGTGGAACCCTGTGCCCTCGAGACTTCCAGAGCAGCCCCGTGTGT
CACAGAGCGGCCCGCGAGGCTTCCGTCTTTGCTTGGCTGAGCGCAGATGAGGATGCTGCA
GACATGTTTAACCCTCATGTGTTAGATTCTCCAGCCGTGATTTTCGACAATGGTTCCGGG
CTCTGCAAGGCGGGGCTGTCTGGAGAGATCGGTCCCCGCCACGTGGTCAGCTCTGTCGTG
GGGCACCCCAAGTTCAAGATGCCTTCGACGGGAGCCAATCAGAAGAAGTACTTTGTGGGG
GAAGAGGCCCTGCACAGGTACGAGGTCTTGCACCTGCACTACCCCATTGAGCGGGGCCTG
ATCACGGGCTGGGATGACATGGAGAAGCTTTGGAAGCACCTCTTCGAGTGGGAGCTGGGG
GTCAAGGCCAGCGACCGGCCGGTGCTCATGACCGAGCCCTCGCTGAACCCCAGGGAGACC
CGCGAGAAGATGGCCGAAGTCATGTTCGAGGGCTTTGCCGTGCCCGCCTTCTACCTGTCG
GACCAGGCGGTGCTGGCCCTCTACGCCTCGGCCTGCGTCACGGGCCTGGTGGTGGACAGC
GGGGACGGGGTCACCTGCACCGTCCCCATCTTCGAGGGCTACTCCCTGCCCCACGCCGTC
ACCAAGCTCTACGTGGCGGGGAGGGACATCACGGAGCACCTCACGCGG
|
|
gi|61879709|ref|XP_593197.1| |
Protein identifier
|
gi|61879709|ref|XP_593197.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
13-768, gnl|bosTau2|chr16 (36112742-36111987) |
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13-768, gnl|Hg17|chr1 (2961255-2961992) |
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13-768, gnl|Mm7|chr4 (153657387-153656635) |
| |
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339-629, gnl|bosTau2|chr10 (19086790-19086500) |
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339-629, gnl|canFam2|chr30 (5506751-5507104) |
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339-629, gnl|dasNov1|scaffold_19757 (44022-43669) |
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339-629, gnl|echTel1|scaffold_318944 (3386-3034) |
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339-629, gnl|fr1|chrUn (63305598-63305946) |
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339-629, gnl|galGal2|chr5 (29145784-29145442) |
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339-629, gnl|hg17|chr15 (32872717-32873069) |
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339-629, gnl|Hg17|chr15 (32873042-32872752) |
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339-629, gnl|loxAfr1|scaffold_10024 (29037-28725) |
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339-629, gnl|mm7|chr2 (113791108-113791460) |
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339-629, gnl|Mm7|chr2 (113791433-113791143) |
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339-629, gnl|monDom2|scaffold_12 (9572456-9572112) |
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339-629, gnl|oryCun1|scaffold_179293 (445-93) |
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339-629, gnl|panTro1|chr16 (32653340-32653692) |
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339-629, gnl|rheMac2|chr7 (13132136-13132488) |
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339-629, gnl|rn3|chr3 (99800397-99800748) |
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339-629, gnl|tetNig1|chr10 (7897220-7896871) |
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339-629, gnl|xenTro1|scaffold_199 (677786-677445) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
13-768, gnl|bosTau2|chr16 (36112742-36111987) |
|
13-768, gnl|Hg17|chr1 (2961255-2961992) |
|
13-768, gnl|Mm7|chr4 (153657387-153656635) |
| |
|
339-629, gnl|bosTau2|chr10 (19086790-19086500) |
|
339-629, gnl|canFam2|chr30 (5506751-5507104) |
|
339-629, gnl|dasNov1|scaffold_19757 (44022-43669) |
|
339-629, gnl|echTel1|scaffold_318944 (3386-3034) |
|
339-629, gnl|fr1|chrUn (63305598-63305946) |
|
339-629, gnl|galGal2|chr5 (29145784-29145442) |
|
339-629, gnl|hg17|chr15 (32872717-32873069) |
|
339-629, gnl|Hg17|chr15 (32873042-32872752) |
|
339-629, gnl|loxAfr1|scaffold_10024 (29037-28725) |
|
339-629, gnl|mm7|chr2 (113791108-113791460) |
|
339-629, gnl|Mm7|chr2 (113791433-113791143) |
|
339-629, gnl|monDom2|scaffold_12 (9572456-9572112) |
|
339-629, gnl|oryCun1|scaffold_179293 (445-93) |
|
339-629, gnl|panTro1|chr16 (32653340-32653692) |
|
339-629, gnl|rheMac2|chr7 (13132136-13132488) |
|
339-629, gnl|rn3|chr3 (99800397-99800748) |
|
339-629, gnl|tetNig1|chr10 (7897220-7896871) |
|
339-629, gnl|xenTro1|scaffold_199 (677786-677445) |
