Non-Coding RNA Search

Ss1.1-Pig2-78D21.5

Sequence:


               
               GCGAGGACTTCCTCGTGCGGAGCTTCTACGCTGAAGTAACCTGCAGACCAGCGAGACGCG
CACCGTGACCCAGTTCCACTTACTGAGCTGGTATGACCAGGGCGTGCCTTCCTCCGCGAG
GTCCCTCCTGGATTTCCGCAGAAAAGTAAACAAGTGCTACAGGGGCCGTTCTTGTCCGAT
AATTGTCCATTGCAGTGACGGCGCCGGCAGGAGTGGCACCTATGTCCTGATCGACATGGT
TCTCAATAAGATGGCCAAAGGCGCCAAGGAGATTGACATCGCGGCGACGCTGGAGCACCT
GCGGGACCAGAGACCGGGCATGGTCCAGACAAAGGAGCAGTTCGAGTTTGCGCTGACGGC
GGTGGCCGAGGAGGTGAACACCATTCTCAAGGCCTTTCCCCAGTGAGCCCTGCCCCGGGG
GTGCTGTCTGCAGCCGCGAGATAATGTCACCGCGTCTCCTAGTGTCACGTCGCCTGCCTA
GTGATCAGCTCCTTAAGCCTCCGTCGTCAGTACAGTTTAGCAGTTAACATGTGCATTTTT
CCTCAACCAAATAATAATCGAGATCTGTGGGACCAAGCAATTACAGGGGACAAGATCAGT
TCATCTATTTTCACGTTCTTGAAAAAAAAAATATTTTTCCTTAAAGCACAGTCCACGTTC
TTCGCCGCCGATCGTGTCGCACGGATGGCACCCGAATGCACACAGTTTGGTCCCCGGAAG
AGAGCTGGCTTGTAACCCCCTAAAGGAAGGTCAGCCGGGCAGGGAGGGGCCCATCGAGGC
TGGCAGGGCACCGAGGGAGGCCACCAGCCGGAGAAAACGCCTTTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAGGACTTCCTCGTGCGGAGCTTCTACGCTGAAGTAACCTGCAGACCAGCGAGACGCG
CACCGTGACCCAGTTCCACTTACTGAGCTGGTATGACCAGGGCGTGCCTTCCTCCGCGAG
GTCCCTCCTGGATTTCCGCAGAAAAGTAAACAAGTGCTACAGGGGCCGTTCTTGTCCGAT
AATTGTCCATTGCAGTGACGGCGCCGGCAGGAGTGGCACCTATGTCCTGATCGACATGGT
TCTCAATAAGATGGCCAAAGGCGCCAAGGAGATTGACATCGCGGCGACGCTGGAGCACCT
GCGGGACCAGAGACCGGGCATGGTCCAGACAAAGGAGCAGTTCGAGTTTGCGCTGACGGC
GGTGGCCGAGGAGGTGAACACCATTCTCAAGGCCTTTCCCCAGTGAGCCCTGCCCCGGGG
GTGCTGTCTGCAGCCGCGAGATAATGTCACCGCGTCTCCTAGTGTCACGTCGCCTGCCTA
GTGATCAGCTCCTTAAGCCTCCGTCGTCAGTACAGTTTAGCAGTTAACATGTGCATTTTT
CCTCAACCAAATAATAATCGAGATCTGTGGGACCAAGCAATTACAGGGGACAAGATCAGT
TCATCTATTTTCACGTTCTTGAAAAAAAAAATATTTTTCCTTAAAGCACAGTCCACGTTC
TTCGCCGCCGATCGTGTCGCACGGATGGCACCCGAATGCACACAGTTTGGTCCCCGGAAG
AGAGCTGGCTTGTAACCCCCTAAAGGAAGGTCAGCCGGGCAGGGAGGGGCCCATCGAGGC
TGGCAGGGCACCGAGGGAGGCCACCAGCCGGAGAAAACGCCTTTGGCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|15718461|gb|AAL05975.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15718461|gb|AAL05975.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-146, gnl|bosTau2|chr3 (85060950-85061093)
               

               
               1-146, gnl|Hg17|chr7 (156868919-156868776)
               

               
               1-146, gnl|Mm7|chr12 (114985911-114986054)
               


               
               333-792, gnl|bosTau2|chr3 (85082111-85082568)
               

               
               333-792, gnl|Hg17|chr7 (156832957-156832452)
               

               
               333-792, gnl|Mm7|chr12 (115013848-115014408)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr3 (85060950-85061093)
               

               
               1-146, gnl|Hg17|chr7 (156868919-156868776)
               

               
               1-146, gnl|Mm7|chr12 (114985911-114986054)
               


               
               333-792, gnl|bosTau2|chr3 (85082111-85082568)
               

               
               333-792, gnl|Hg17|chr7 (156832957-156832452)
               

               
               333-792, gnl|Mm7|chr12 (115013848-115014408)

	1-146, gnl\|bosTau2\|chr3 (85060950-85061093)
	1-146, gnl\|Hg17\|chr7 (156868919-156868776)
	1-146, gnl\|Mm7\|chr12 (114985911-114986054)

	333-792, gnl\|bosTau2\|chr3 (85082111-85082568)
	333-792, gnl\|Hg17\|chr7 (156832957-156832452)
	333-792, gnl\|Mm7\|chr12 (115013848-115014408)