Ss1.1-Pig2-79B17.5
|
GGAAGAGCTGTTCCTCAGCTCCCCGCTGGCCCAGCAGCTCTCATTCCTGCGCAGCGGCCT
CCTGAGTGGCCTCTACCTGCACGTGGGTGATAGACCTGAGGCCCTGCTCCGGTGGCTGTT
CCAGCTGCTGACATGGCTTCCAGAAACTTCTTTGGGAGCCTTTGGTCTCCTGTGGGACCT
CAGTGTGGATGGGCTCATCCGTCAATCTGATGAGGACACGTACTTGTGGTGCCCCTCGCT
GCAAGAGGTCACGGCCGCATTCCGCAGCCTGGGAGCCCGAAGCCCAGCACTGCACCCCCT
GGGGCCCTTCCAGCACAGTGGGAGCAAGGCCAACCTGAGCCAGTGTGAGCAGCAGGACAC
CCCCGGGGAGACGGCCCTGGACATCAGTCTGAGCCACATCTGTAAGTTCCTGATGCTGTG
TGCCCTGGCCCAACCAGGGGCCTACCCCGACGGGAGCCTTTTGGGCCTGATTGAGCTGAT
ATGTCAAGCCGGCCTGGATGTGGGACTCCGCCTACTGCCCAAGACTGACCTCCAGCAGCT
CCTGCTCCTGCTCCTGGAGAACATCCAGGAGTGGCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGAAGAGCTGTTCCTCAGCTCCCCGCTGGCCCAGCAGCTCTCATTCCTGCGCAGCGGCCT
CCTGAGTGGCCTCTACCTGCACGTGGGTGATAGACCTGAGGCCCTGCTCCGGTGGCTGTT
CCAGCTGCTGACATGGCTTCCAGAAACTTCTTTGGGAGCCTTTGGTCTCCTGTGGGACCT
CAGTGTGGATGGGCTCATCCGTCAATCTGATGAGGACACGTACTTGTGGTGCCCCTCGCT
GCAAGAGGTCACGGCCGCATTCCGCAGCCTGGGAGCCCGAAGCCCAGCACTGCACCCCCT
GGGGCCCTTCCAGCACAGTGGGAGCAAGGCCAACCTGAGCCAGTGTGAGCAGCAGGACAC
CCCCGGGGAGACGGCCCTGGACATCAGTCTGAGCCACATCTGTAAGTTCCTGATGCTGTG
TGCCCTGGCCCAACCAGGGGCCTACCCCGACGGGAGCCTTTTGGGCCTGATTGAGCTGAT
ATGTCAAGCCGGCCTGGATGTGGGACTCCGCCTACTGCCCAAGACTGACCTCCAGCAGCT
CCTGCTCCTGCTCCTGGAGAACATCCAGGAGTGGCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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209-324, gnl|bosTau2|chr11 (3382185-3382300) |
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209-324, gnl|canFam2|chr10 (48184289-48184059) |
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209-324, gnl|echTel1|scaffold_291433 (39841-40041) |
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209-324, gnl|hg17|chr2 (97016789-97017015) |
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209-324, gnl|Hg17|chr2 (97016932-97016817) |
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209-324, gnl|mm7|chr1 (36849774-36849990) |
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209-324, gnl|Mm7|chr1 (36849913-36849798) |
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209-324, gnl|monDom2|scaffold_1 (154582561-154582792) |
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209-324, gnl|oryCun1|scaffold_214356 (26485-26693) |
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209-324, gnl|panTro1|chr12 (100038641-100038867) |
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209-324, gnl|rheMac2|chr13 (97365971-97366196) |
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209-324, gnl|rn3|chr9 (35554028-35554217) |
| |
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405-576, gnl|bosTau2|chr11 (3390558-3390729) |
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405-576, gnl|Hg17|chr2 (97009267-97009096) |
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405-576, gnl|Mm7|chr1 (36841967-36841796) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
209-324, gnl|bosTau2|chr11 (3382185-3382300) |
|
209-324, gnl|canFam2|chr10 (48184289-48184059) |
|
209-324, gnl|echTel1|scaffold_291433 (39841-40041) |
|
209-324, gnl|hg17|chr2 (97016789-97017015) |
|
209-324, gnl|Hg17|chr2 (97016932-97016817) |
|
209-324, gnl|mm7|chr1 (36849774-36849990) |
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209-324, gnl|Mm7|chr1 (36849913-36849798) |
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209-324, gnl|monDom2|scaffold_1 (154582561-154582792) |
|
209-324, gnl|oryCun1|scaffold_214356 (26485-26693) |
|
209-324, gnl|panTro1|chr12 (100038641-100038867) |
|
209-324, gnl|rheMac2|chr13 (97365971-97366196) |
|
209-324, gnl|rn3|chr9 (35554028-35554217) |
| |
|
405-576, gnl|bosTau2|chr11 (3390558-3390729) |
|
405-576, gnl|Hg17|chr2 (97009267-97009096) |
|
405-576, gnl|Mm7|chr1 (36841967-36841796) |
