Non-Coding RNA Search

Ss1.1-Pig2-79I19.5

Sequence:


               
               ACAGCTTTTCTTAATGCAAGTCACCTGAAAAGTGGTATTTGCTACCTGGAATTTTTTGAC
CAATTTACATGACATACATAGAATTTAAGGGTCTCCCGGATTCTACCAATAATACTGAAA
AGCACACCTGCCTAAGGCAAAGCTTTTGTTGTTGTTGTAGAAATATATACGTTCATTTAA
AAAAAAATTAAAAATGGACGTGCAAATTTCATCTCCATAGGAGATACACTTTATACATTT
TGGTATGTGTGTGGTTTTTTTCCCACTATGGATTTCTCTTTGTTTCTCTCTTCCATTTGT
TCTTTTCCTGGGTTACTCCTATATGTCCTAATAATCTTTCATGCCTCTTGTGTAGTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGCTTTTCTTAATGCAAGTCACCTGAAAAGTGGTATTTGCTACCTGGAATTTTTTGAC
CAATTTACATGACATACATAGAATTTAAGGGTCTCCCGGATTCTACCAATAATACTGAAA
AGCACACCTGCCTAAGGCAAAGCTTTTGTTGTTGTTGTAGAAATATATACGTTCATTTAA
AAAAAAATTAAAAATGGACGTGCAAATTTCATCTCCATAGGAGATACACTTTATACATTT
TGGTATGTGTGTGGTTTTTTTCCCACTATGGATTTCTCTTTGTTTCTCTCTTCCATTTGT
TCTTTTCCTGGGTTACTCCTATATGTCCTAATAATCTTTCATGCCTCTTGTGTAGTTTCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               153-309, - strand, RNAz p=0.999956

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               153-309, - strand, RNAz p=0.999956

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-360, gnl|bosTau2|chr19 (18574575-18574245)
               

               
               18-360, gnl|Hg17|chr17 (5316350-5316016)
               

               
               18-360, gnl|Mm7|chr11 (71090072-71089697)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-360, gnl|bosTau2|chr19 (18574575-18574245)
               

               
               18-360, gnl|Hg17|chr17 (5316350-5316016)
               

               
               18-360, gnl|Mm7|chr11 (71090072-71089697)

	18-360, gnl\|bosTau2\|chr19 (18574575-18574245)
	18-360, gnl\|Hg17\|chr17 (5316350-5316016)
	18-360, gnl\|Mm7\|chr11 (71090072-71089697)