Non-Coding RNA Search

Ss1.1-Pig2-79L18.5

Sequence:


               
               CTCAGAAGCTGGGCGGCTCCCCCCCTTCGATTGCTTGTCTTACGCAGCAGCTTTGCAAGT
GTTATCCAGGAGGTGCTACGGGAAGCAGAGGTGCAAAATCCTGGTCAACAACCACCATTT
CGGAAGCCCCTGTCTGCCAGGAGTGAAAAAATACCTCACTGTCACCTATGCATGTGTTCC
CAAGAACATACTCACAGCGATTGATCCAGGTGTTGCTGATCTCAAACCTTCTTCGACGCA
GAAAGATGGTGACTACGGTATAAAGTTTGACCCAAGAGAACCGAGGGTTCTGAGGAAAGA
TGGAGTCATTGTCAGCCACTCTCTGGCAGCATTTGCTTACCTCCGAGGAGTGATGAGATC
GTGCCCATCGGGGCAATGGCAGCAAAGAACCTCCTAGTGCCTTGAGCCTTGGGTGGAGGA
AACCGAATGGCGAGGTTTCAAGTTTCCAGAAGATAACGTGTCCCGCTTAGATCTCTCCTG
TCAGATCACAGCTGCCGTATCCCTTGACTGTACATGAAACGGAACAACCCTGGAATTCTG
AACCTCCAGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGAAGCTGGGCGGCTCCCCCCCTTCGATTGCTTGTCTTACGCAGCAGCTTTGCAAGT
GTTATCCAGGAGGTGCTACGGGAAGCAGAGGTGCAAAATCCTGGTCAACAACCACCATTT
CGGAAGCCCCTGTCTGCCAGGAGTGAAAAAATACCTCACTGTCACCTATGCATGTGTTCC
CAAGAACATACTCACAGCGATTGATCCAGGTGTTGCTGATCTCAAACCTTCTTCGACGCA
GAAAGATGGTGACTACGGTATAAAGTTTGACCCAAGAGAACCGAGGGTTCTGAGGAAAGA
TGGAGTCATTGTCAGCCACTCTCTGGCAGCATTTGCTTACCTCCGAGGAGTGATGAGATC
GTGCCCATCGGGGCAATGGCAGCAAAGAACCTCCTAGTGCCTTGAGCCTTGGGTGGAGGA
AACCGAATGGCGAGGTTTCAAGTTTCCAGAAGATAACGTGTCCCGCTTAGATCTCTCCTG
TCAGATCACAGCTGCCGTATCCCTTGACTGTACATGAAACGGAACAACCCTGGAATTCTG
AACCTCCAGTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61869998|ref|XP_613197.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61869998|ref|XP_613197.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               22-176, gnl|bosTau2|chr1 (246910-247061)
               

               
               22-176, gnl|Hg17|chr21 (32789200-32789351)
               

               
               22-176, gnl|Mm7|chr16 (90940423-90940574)
               


               
               396-552, gnl|bosTau2|chr1 (269214-269370)
               

               
               396-552, gnl|Mm7|chr16 (90953301-90953442)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-176, gnl|bosTau2|chr1 (246910-247061)
               

               
               22-176, gnl|Hg17|chr21 (32789200-32789351)
               

               
               22-176, gnl|Mm7|chr16 (90940423-90940574)
               


               
               396-552, gnl|bosTau2|chr1 (269214-269370)
               

               
               396-552, gnl|Mm7|chr16 (90953301-90953442)

	22-176, gnl\|bosTau2\|chr1 (246910-247061)
	22-176, gnl\|Hg17\|chr21 (32789200-32789351)
	22-176, gnl\|Mm7\|chr16 (90940423-90940574)

	396-552, gnl\|bosTau2\|chr1 (269214-269370)
	396-552, gnl\|Mm7\|chr16 (90953301-90953442)