Ss1.1-Pig2-85J05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGCTACGTAGGATCTAGAACTAGGGGGGCCGTTCTGCCTTCGTTAAATCTTCCTGTAT CTTCTCCATTCCAAATGGCGCTACGTAGGATCTAGAACTAGGTTGTCCGAATCTCCTCTC CCCTCCTCTAGCTCGATTTCTCCCCCCTCAAAGCTGACCTCCACCGGCCCCGCCGCCTCA GAGTGAAATCATGAAGGTGGTGAACCTGAAGCAAGCCATTTTGCAAGCTTGGAAGGAGCG ATGGAGTGACTACCAGTGGTCAATCAACATGAAGAAATTCTTTCCCAAAGGAGCCACCTG GGACATTCTCAACCTAGCAGAAGCACTACTGGAGCAGGCCATGATTGGACCGTCCCCCAA TCCTCTCATCCTGTCCTACCTGAAGTATGCCATTAGTTCCCAGATGGTGTCCTACTCCTC CGTCCTCACAGCTATCAGTAAGTTTGATGACTTCTCCCGGGATCTGTGTGTCCAGGCTTT GCTGGACATCATGGACATGTTTTGTGACCGGCTGAGCTGTCATGGCAAAGCGGAGGAGTG CATCGGGCTGTGCCGGGCCCTTCTCAGCGCCCTCCACTGGCTGCTGCGCTGCACCGCAGC CTCTGCAGAGCGGCTCCGGGAGGGGCTGGAGGCTGGCACTCCAGCCGCTGGCGAGAAGCA GCTTGCCATGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGCTACGTAGGATCTAGAACTAGGGGGGCCGTTCTGCCTTCGTTAAATCTTCCTGTAT CTTCTCCATTCCAAATGGCGCTACGTAGGATCTAGAACTAGGTTGTCCGAATCTCCTCTC CCCTCCTCTAGCTCGATTTCTCCCCCCTCAAAGCTGACCTCCACCGGCCCCGCCGCCTCA GAGTGAAATCATGAAGGTGGTGAACCTGAAGCAAGCCATTTTGCAAGCTTGGAAGGAGCG ATGGAGTGACTACCAGTGGTCAATCAACATGAAGAAATTCTTTCCCAAAGGAGCCACCTG GGACATTCTCAACCTAGCAGAAGCACTACTGGAGCAGGCCATGATTGGACCGTCCCCCAA TCCTCTCATCCTGTCCTACCTGAAGTATGCCATTAGTTCCCAGATGGTGTCCTACTCCTC CGTCCTCACAGCTATCAGTAAGTTTGATGACTTCTCCCGGGATCTGTGTGTCCAGGCTTT GCTGGACATCATGGACATGTTTTGTGACCGGCTGAGCTGTCATGGCAAAGCGGAGGAGTG CATCGGGCTGTGCCGGGCCCTTCTCAGCGCCCTCCACTGGCTGCTGCGCTGCACCGCAGC CTCTGCAGAGCGGCTCCGGGAGGGGCTGGAGGCTGGCACTCCAGCCGCTGGCGAGAAGCA GCTTGCCATGTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 554-672, + strand, RNAz p=0.536554 | |
| 554-672, - strand, RNAz p=0.536554 | |
| 554-672, + strand, RNAz p=0.925546 | |
| 554-672, - strand, RNAz p=0.925546 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 554-672, + strand, RNAz p=0.536554 | |
| 554-672, - strand, RNAz p=0.536554 | |
| 554-672, + strand, RNAz p=0.925546 | |
| 554-672, - strand, RNAz p=0.925546 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 106-320, gnl|bosTau2|chr19 (34542781-34542994) | |
| 106-320, gnl|canFam2|chr9 (25829394-25829235) | |
| 106-320, gnl|danRer3|chr23 (14748569-14748701) | |
| 106-320, gnl|dasNov1|scaffold_3272 (11114-10955) | |
| 106-320, gnl|echTel1|scaffold_80183 (4095-3937) | |
| 106-320, gnl|fr1|chrUn (145543527-145543381) | |
| 106-320, gnl|galGal2|chrUn (131911936-131912071) | |
| 106-320, gnl|hg17|chr17 (35463223-35463382) | |
| 106-320, gnl|Hg17|chr17 (35463462-35463248) | |
| 106-320, gnl|loxAfr1|scaffold_91880 (5381-5222) | |
| 106-320, gnl|mm7|chr11 (98837798-98837958) | |
| 106-320, gnl|Mm7|chr11 (98838030-98837824) | |
| 106-320, gnl|monDom2|scaffold_18 (49282112-49282268) | |
| 106-320, gnl|oryCun1|scaffold_169942 (10619-10461) | |
| 106-320, gnl|panTro1|chr19 (38701782-38701941) | |
| 106-320, gnl|rheMac2|chr16 (50157296-50157455) | |
| 106-320, gnl|rn3|chr10 (87516459-87516619) | |
| 106-320, gnl|tetNig1|chr2 (4503147-4503290) | |
| 106-320, gnl|xenTro1|scaffold_343 (5768-5608) | |
| 515-672, gnl|bosTau2|chr19 (34552719-34552876) | |
| 515-672, gnl|canFam2|chr9 (25841943-25841736) | |
| 515-672, gnl|danRer3|chr23 (14745989-14746176) | |
| 515-672, gnl|echTel1|scaffold_322583 (50544-50751) | |
| 515-672, gnl|fr1|chrUn (145544398-145544212) | |
| 515-672, gnl|galGal2|chrUn (131907242-131907440) | |
| 515-672, gnl|hg17|chr17 (35444890-35445097) | |
| 515-672, gnl|Hg17|chr17 (35445130-35444973) | |
| 515-672, gnl|mm7|chr11 (98826943-98827150) | |
| 515-672, gnl|Mm7|chr11 (98827183-98827026) | |
| 515-672, gnl|monDom2|scaffold_18 (49277209-49277413) | |
| 515-672, gnl|oryCun1|scaffold_199304 (9568-9772) | |
| 515-672, gnl|panTro1|chr19 (38683465-38683672) | |
| 515-672, gnl|rheMac2|chr16 (50135653-50135860) | |
| 515-672, gnl|rn3|chr10 (87504676-87504883) | |
| 515-672, gnl|tetNig1|chr2 (4502126-4502312) | |
| 515-672, gnl|xenTro1|scaffold_343 (9054-8856) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 106-320, gnl|bosTau2|chr19 (34542781-34542994) | |
| 106-320, gnl|canFam2|chr9 (25829394-25829235) | |
| 106-320, gnl|danRer3|chr23 (14748569-14748701) | |
| 106-320, gnl|dasNov1|scaffold_3272 (11114-10955) | |
| 106-320, gnl|echTel1|scaffold_80183 (4095-3937) | |
| 106-320, gnl|fr1|chrUn (145543527-145543381) | |
| 106-320, gnl|galGal2|chrUn (131911936-131912071) | |
| 106-320, gnl|hg17|chr17 (35463223-35463382) | |
| 106-320, gnl|Hg17|chr17 (35463462-35463248) | |
| 106-320, gnl|loxAfr1|scaffold_91880 (5381-5222) | |
| 106-320, gnl|mm7|chr11 (98837798-98837958) | |
| 106-320, gnl|Mm7|chr11 (98838030-98837824) | |
| 106-320, gnl|monDom2|scaffold_18 (49282112-49282268) | |
| 106-320, gnl|oryCun1|scaffold_169942 (10619-10461) | |
| 106-320, gnl|panTro1|chr19 (38701782-38701941) | |
| 106-320, gnl|rheMac2|chr16 (50157296-50157455) | |
| 106-320, gnl|rn3|chr10 (87516459-87516619) | |
| 106-320, gnl|tetNig1|chr2 (4503147-4503290) | |
| 106-320, gnl|xenTro1|scaffold_343 (5768-5608) | |
| 515-672, gnl|bosTau2|chr19 (34552719-34552876) | |
| 515-672, gnl|canFam2|chr9 (25841943-25841736) | |
| 515-672, gnl|danRer3|chr23 (14745989-14746176) | |
| 515-672, gnl|echTel1|scaffold_322583 (50544-50751) | |
| 515-672, gnl|fr1|chrUn (145544398-145544212) | |
| 515-672, gnl|galGal2|chrUn (131907242-131907440) | |
| 515-672, gnl|hg17|chr17 (35444890-35445097) | |
| 515-672, gnl|Hg17|chr17 (35445130-35444973) | |
| 515-672, gnl|mm7|chr11 (98826943-98827150) | |
| 515-672, gnl|Mm7|chr11 (98827183-98827026) | |
| 515-672, gnl|monDom2|scaffold_18 (49277209-49277413) | |
| 515-672, gnl|oryCun1|scaffold_199304 (9568-9772) | |
| 515-672, gnl|panTro1|chr19 (38683465-38683672) | |
| 515-672, gnl|rheMac2|chr16 (50135653-50135860) | |
| 515-672, gnl|rn3|chr10 (87504676-87504883) | |
| 515-672, gnl|tetNig1|chr2 (4502126-4502312) | |
| 515-672, gnl|xenTro1|scaffold_343 (9054-8856) |