Non-Coding RNA Search

Ss1.1-Pig2-88P07.5

Sequence:


               
               AAGCCATATAAAAAAGTTCACTATTCTTTACAGTGGAATTGGTACGAAAAATTTGTTTCA
TCATGTATATATCTTCCGTCTCCAGTGATTTTTCTTCATAGTAAGATATTTACCAATCAT
TTAGTCATGAAGAATTACTTCTATTATTTCCAGGCAGATGTTATATTTTCTAATTAGTAG
TAGTTTGTGCCTTAAAGACTAACTTAAAATAAAATGTTAGTATCTTGTAAATTTGATTCT
TTCTACCCCATAATTTTTATTTTCATCTCATTATGTAACCATAACGCTAGGTTTCTCAGC
CTTAGTACTTCTGACATTTGGGGCAGATAATTCTTTGTCGTGAGGGGCCCTTCTGTCCAT
TGAAGAATGTTGAGCAGCAACTCTGGCCTCTACCCGCAAGACTCCAGGAGCACTCCCCAG
TTCCAGACACTGCCAGGTATCCCCTAGGGGCCCAAATTGACTCCAGTTGAGAATCACTGC
CATAGTGTATTTCATAAAATTCTTTTTATGCCTTTCAGAGCATAATTTGGAAAAAAGCAG
TGTACCTCTTAGTAGCTAGACACAGAATCAGCAGAACGGAAAAGCTACCGGGCGGTATTG
CAGACAGCAGGGCATAAATAAAAAGGTCAGAAACAAGAACTACATTTCTTAATCAAAGTC
TAGGTTGTCTAGGTAATTGGTACAGAACAGACCACTGGGAACAGCTTAGAGCCACACAGG
GACATAAAATTAGTTAATAGCTGCAGATGTCATTTGTGGCTGTTTTTCTTCAATCTTTTA
AAATGTAAAGCAGCAGGATCTGCAGAAATGGAAGGACAGGTGAAGATCCTTTTGCTATTT
CGTGGTACCCCCAAATCACAGTAACTTCCATGGCAAACTGGAAGGAAACAGTATCACCCC
TTTTGTCACGACGTCTACCGCAGGCGATGCCCAGTGCCCTGCTGGGAACGTCGTTAACCC
AACTTCCTCTCCAGAATTTTTGGCATGTTCTGTGTCATGACGAACACTCAGCAGGCAGGC
CAATTCACAGAGTGGTTTTTGGGTTTAACATATGCCAGAGAAAATCTTTACATGTAGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCCATATAAAAAAGTTCACTATTCTTTACAGTGGAATTGGTACGAAAAATTTGTTTCA
TCATGTATATATCTTCCGTCTCCAGTGATTTTTCTTCATAGTAAGATATTTACCAATCAT
TTAGTCATGAAGAATTACTTCTATTATTTCCAGGCAGATGTTATATTTTCTAATTAGTAG
TAGTTTGTGCCTTAAAGACTAACTTAAAATAAAATGTTAGTATCTTGTAAATTTGATTCT
TTCTACCCCATAATTTTTATTTTCATCTCATTATGTAACCATAACGCTAGGTTTCTCAGC
CTTAGTACTTCTGACATTTGGGGCAGATAATTCTTTGTCGTGAGGGGCCCTTCTGTCCAT
TGAAGAATGTTGAGCAGCAACTCTGGCCTCTACCCGCAAGACTCCAGGAGCACTCCCCAG
TTCCAGACACTGCCAGGTATCCCCTAGGGGCCCAAATTGACTCCAGTTGAGAATCACTGC
CATAGTGTATTTCATAAAATTCTTTTTATGCCTTTCAGAGCATAATTTGGAAAAAAGCAG
TGTACCTCTTAGTAGCTAGACACAGAATCAGCAGAACGGAAAAGCTACCGGGCGGTATTG
CAGACAGCAGGGCATAAATAAAAAGGTCAGAAACAAGAACTACATTTCTTAATCAAAGTC
TAGGTTGTCTAGGTAATTGGTACAGAACAGACCACTGGGAACAGCTTAGAGCCACACAGG
GACATAAAATTAGTTAATAGCTGCAGATGTCATTTGTGGCTGTTTTTCTTCAATCTTTTA
AAATGTAAAGCAGCAGGATCTGCAGAAATGGAAGGACAGGTGAAGATCCTTTTGCTATTT
CGTGGTACCCCCAAATCACAGTAACTTCCATGGCAAACTGGAAGGAAACAGTATCACCCC
TTTTGTCACGACGTCTACCGCAGGCGATGCCCAGTGCCCTGCTGGGAACGTCGTTAACCC
AACTTCCTCTCCAGAATTTTTGGCATGTTCTGTGTCATGACGAACACTCAGCAGGCAGGC
CAATTCACAGAGTGGTTTTTGGGTTTAACATATGCCAGAGAAAATCTTTACATGTAGCTA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               11-549, gnl|bosTau2|chr3 (39858598-39859141)
               

               
               11-549, gnl|Hg17|chr1 (93058017-93057504)
               


               
               551-1060, gnl|bosTau2|chr3 (39859345-39859856)
               

               
               551-1060, gnl|Hg17|chr1 (93057500-93056995)
               

               
               551-1060, gnl|Mm7|chr5 (107110621-107110140)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-549, gnl|bosTau2|chr3 (39858598-39859141)
               

               
               11-549, gnl|Hg17|chr1 (93058017-93057504)
               


               
               551-1060, gnl|bosTau2|chr3 (39859345-39859856)
               

               
               551-1060, gnl|Hg17|chr1 (93057500-93056995)
               

               
               551-1060, gnl|Mm7|chr5 (107110621-107110140)

	11-549, gnl\|bosTau2\|chr3 (39858598-39859141)
	11-549, gnl\|Hg17\|chr1 (93058017-93057504)

	551-1060, gnl\|bosTau2\|chr3 (39859345-39859856)
	551-1060, gnl\|Hg17\|chr1 (93057500-93056995)
	551-1060, gnl\|Mm7\|chr5 (107110621-107110140)