Ss1.1-Pig2-89O05.5
|
CGCAGCAGTTCGGCGTGACTGAGTGGTGCGTGAACGGCTCACCCATCGAGACACTGAGTG
AGTGGATCAAGCACCGGCCCCAGAAGGTGGGCGCCTACCGCAGCTACATCCAGGGCGGCC
GTCCCTTCACCAAGAAGTTTCGCAGTGCCGGCCACGGCCGCGATGGCGACAAGCGGCTGC
CCCTGGGGCTGGCACCCGGGGGCCTGGCTGTGGTGGGCCGCAGTGCTGGGGGTGAGCCAG
GGCCCGAGGCTGGCCGGGCAGCTGACAGTGGTGAGCGGCCTCTGGCAGCCAGCCCACCAG
GCACTGTGAAGGCTGAGGAGCACCAGCGGCAGAACATCAACAAATTTGAACGCCGACAAG
CCCGCCCTCCAGATGCCTCTGCAGCCCGGGGGGGTGAGGAGGCCAATGACCTGCAGCAGA
AGCTGGAGGAGGTGCGGCAACCTCCACCCCGGGTTCGGCCAGTCCCCTCCCTGGTGCCCC
GGCCCCCCCAGACATCACTCGTCAAGTTCGTTGGCAACATCTACACCCTCAAGTGCAGGT
TCTGTGAGGTGGAATTCCAGGGGCCCCTCTCCATCCAGGAGGAGTGGGTGCGGCACTTAC
AGCGGCACATCCTGGAGATGAATTTCTCCAAAGCGGACCCCCCGCCCGAGGAGCCTCAGG
CCCCACAGGCACAGACAGCGGCGACAGAGGCACCCTAACACAAAAGCATTCCAGATACCC
TCTCATGCCACCTGTCTATCTCCTCTTCCTCCTCAGTCTCCTTCTCCCACTCCCCCTTGT
TTCTTTTCCGTTTCCAAAGGAGCAAGCCAAAACCTCAAACCGGCACCTTTTAGGGGCCGG
GCACACTACAGCCGGGGCACCGGAAGCCAGCTAGCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCAGCAGTTCGGCGTGACTGAGTGGTGCGTGAACGGCTCACCCATCGAGACACTGAGTG
AGTGGATCAAGCACCGGCCCCAGAAGGTGGGCGCCTACCGCAGCTACATCCAGGGCGGCC
GTCCCTTCACCAAGAAGTTTCGCAGTGCCGGCCACGGCCGCGATGGCGACAAGCGGCTGC
CCCTGGGGCTGGCACCCGGGGGCCTGGCTGTGGTGGGCCGCAGTGCTGGGGGTGAGCCAG
GGCCCGAGGCTGGCCGGGCAGCTGACAGTGGTGAGCGGCCTCTGGCAGCCAGCCCACCAG
GCACTGTGAAGGCTGAGGAGCACCAGCGGCAGAACATCAACAAATTTGAACGCCGACAAG
CCCGCCCTCCAGATGCCTCTGCAGCCCGGGGGGGTGAGGAGGCCAATGACCTGCAGCAGA
AGCTGGAGGAGGTGCGGCAACCTCCACCCCGGGTTCGGCCAGTCCCCTCCCTGGTGCCCC
GGCCCCCCCAGACATCACTCGTCAAGTTCGTTGGCAACATCTACACCCTCAAGTGCAGGT
TCTGTGAGGTGGAATTCCAGGGGCCCCTCTCCATCCAGGAGGAGTGGGTGCGGCACTTAC
AGCGGCACATCCTGGAGATGAATTTCTCCAAAGCGGACCCCCCGCCCGAGGAGCCTCAGG
CCCCACAGGCACAGACAGCGGCGACAGAGGCACCCTAACACAAAAGCATTCCAGATACCC
TCTCATGCCACCTGTCTATCTCCTCTTCCTCCTCAGTCTCCTTCTCCCACTCCCCCTTGT
TTCTTTTCCGTTTCCAAAGGAGCAAGCCAAAACCTCAAACCGGCACCTTTTAGGGGCCGG
GCACACTACAGCCGGGGCACCGGAAGCCAGCTAGCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
195-342, gnl|bosTau2|chr7 (6904544-6904691) |
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195-342, gnl|canFam2|chr20 (49769906-49769802) |
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195-342, gnl|dasNov1|scaffold_154861 (1940-2044) |
|
195-342, gnl|echTel1|scaffold_311403 (77138-77034) |
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195-342, gnl|hg17|chr19 (15396416-15396521) |
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195-342, gnl|loxAfr1|scaffold_28261 (6011-5907) |
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195-342, gnl|mm7|chr17 (30551743-30551847) |
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195-342, gnl|monDom2|scaffold_100 (1148332-1148437) |
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195-342, gnl|oryCun1|scaffold_215274 (5453-5349) |
|
195-342, gnl|panTro1|chr20 (16111412-16111516) |
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195-342, gnl|rheMac2|chr19 (15018900-15019004) |
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195-342, gnl|rn3|chr7 (12926875-12926979) |
| |
|
536-876, gnl|bosTau2|chr7 (6906157-6906483) |
|
536-876, gnl|Hg17|chr19 (15395049-15394712) |
|
536-876, gnl|Mm7|chr17 (30550047-30549712) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
195-342, gnl|bosTau2|chr7 (6904544-6904691) |
|
195-342, gnl|canFam2|chr20 (49769906-49769802) |
|
195-342, gnl|dasNov1|scaffold_154861 (1940-2044) |
|
195-342, gnl|echTel1|scaffold_311403 (77138-77034) |
|
195-342, gnl|hg17|chr19 (15396416-15396521) |
|
195-342, gnl|loxAfr1|scaffold_28261 (6011-5907) |
|
195-342, gnl|mm7|chr17 (30551743-30551847) |
|
195-342, gnl|monDom2|scaffold_100 (1148332-1148437) |
|
195-342, gnl|oryCun1|scaffold_215274 (5453-5349) |
|
195-342, gnl|panTro1|chr20 (16111412-16111516) |
|
195-342, gnl|rheMac2|chr19 (15018900-15019004) |
|
195-342, gnl|rn3|chr7 (12926875-12926979) |
| |
|
536-876, gnl|bosTau2|chr7 (6906157-6906483) |
|
536-876, gnl|Hg17|chr19 (15395049-15394712) |
|
536-876, gnl|Mm7|chr17 (30550047-30549712) |
