Ss1.1-Pig2-8J07.5
|
GGTCAAGGGCATGGTCAAAACTCTTCCTCGGTGAACCTGCTGGGCCTCAGTACCAGCCTC
AACAGCAGCCTCCACAGCGCCCTCAACAGCAGCCTCCTGGCTGGCCCGCCCGAGTTGACT
TCAGGGGGCAGCCCGGCCCCTGAGCCCCCAGCCCGGGACACCGCCGTGCTCAGCCTCCTC
ATCATGCTGGGCACACTCTGGCTGAGCTACACCCTCTACCAGTTCAAGAAGAGCCCCTAC
CTGCACCCCTACATGCGCGAGATCCTGTCCGACTGCGCCCTGCCCATCTCCGTGCTCACC
TTCTCCCTCATCTGCTCCTATGGCTTCCGGGAGATTAAGATGGGCAAGTTCCGCTACAAC
CCGAGCGAGAGCCTGTTTGAGATGCCCGAGATGCACTCACTGTCCCTGGCAGCCATCAGC
AGTGCCATGGGCCTCGGCTTCCTCCTCTCCTTGCTCTTCTTCATCGAGCAGAACCTGGTG
GCTGCCCTGGCTAACGCCCCGGAGAACAGGCTGGTAAAGGGCACTGCCTACCACTGGGAC
CTCCTGCTCATCGCCATCATCAACACCGGGCTGTCTCTGTTCGGGCTGCCCTGGATCCAC
GCTGCCTACCCCCACTCCCCGCTGCACGTTCGGGCACTGGCTTTGGTGGAGGAGCGTGTG
GAGAATGGGCACATTTACGAGACGATCGTGAACGTGAGGGAGACGCGGCTGACCACCCTG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGTCAAGGGCATGGTCAAAACTCTTCCTCGGTGAACCTGCTGGGCCTCAGTACCAGCCTC
AACAGCAGCCTCCACAGCGCCCTCAACAGCAGCCTCCTGGCTGGCCCGCCCGAGTTGACT
TCAGGGGGCAGCCCGGCCCCTGAGCCCCCAGCCCGGGACACCGCCGTGCTCAGCCTCCTC
ATCATGCTGGGCACACTCTGGCTGAGCTACACCCTCTACCAGTTCAAGAAGAGCCCCTAC
CTGCACCCCTACATGCGCGAGATCCTGTCCGACTGCGCCCTGCCCATCTCCGTGCTCACC
TTCTCCCTCATCTGCTCCTATGGCTTCCGGGAGATTAAGATGGGCAAGTTCCGCTACAAC
CCGAGCGAGAGCCTGTTTGAGATGCCCGAGATGCACTCACTGTCCCTGGCAGCCATCAGC
AGTGCCATGGGCCTCGGCTTCCTCCTCTCCTTGCTCTTCTTCATCGAGCAGAACCTGGTG
GCTGCCCTGGCTAACGCCCCGGAGAACAGGCTGGTAAAGGGCACTGCCTACCACTGGGAC
CTCCTGCTCATCGCCATCATCAACACCGGGCTGTCTCTGTTCGGGCTGCCCTGGATCCAC
GCTGCCTACCCCCACTCCCCGCTGCACGTTCGGGCACTGGCTTTGGTGGAGGAGCGTGTG
GAGAATGGGCACATTTACGAGACGATCGTGAACGTGAGGGAGACGCGGCTGACCACCCTG |
|
gi|61861838|ref|XP_610924.1| |
Protein identifier
|
gi|61861838|ref|XP_610924.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
56-233, gnl|bosTau2|chr13 (34593872-34593695) |
|
56-233, gnl|canFam2|chr24 (21063570-21063454) |
|
56-233, gnl|danRer3|chr13 (18578136-18578224) |
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56-233, gnl|echTel1|scaffold_295720 (39847-39748) |
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56-233, gnl|fr1|chrUn (102381719-102381815) |
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56-233, gnl|galGal2|chr4 (88870567-88870664) |
|
56-233, gnl|hg17|chr20 (3158162-3158266) |
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56-233, gnl|Hg17|chr20 (3158344-3158170) |
|
56-233, gnl|mm7|chr2 (130426876-130426995) |
|
56-233, gnl|Mm7|chr2 (130427073-130426884) |
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56-233, gnl|monDom2|scaffold_10 (49134579-49134684) |
|
56-233, gnl|oryCun1|scaffold_200443 (165598-165479) |
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56-233, gnl|panTro1|chr21 (3138730-3138834) |
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56-233, gnl|rheMac2|chr10 (36539241-36539345) |
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56-233, gnl|rn3|chr3 (118220589-118220692) |
|
56-233, gnl|tetNig1|chr10 (12142143-12142226) |
|
56-233, gnl|xenTro1|scaffold_1461 (96369-96269) |
| |
|
507-684, gnl|bosTau2|chr13 (34593172-34592995) |
|
507-684, gnl|Hg17|chr20 (3157660-3157483) |
|
507-684, gnl|Mm7|chr2 (130426260-130426083) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
56-233, gnl|bosTau2|chr13 (34593872-34593695) |
|
56-233, gnl|canFam2|chr24 (21063570-21063454) |
|
56-233, gnl|danRer3|chr13 (18578136-18578224) |
|
56-233, gnl|echTel1|scaffold_295720 (39847-39748) |
|
56-233, gnl|fr1|chrUn (102381719-102381815) |
|
56-233, gnl|galGal2|chr4 (88870567-88870664) |
|
56-233, gnl|hg17|chr20 (3158162-3158266) |
|
56-233, gnl|Hg17|chr20 (3158344-3158170) |
|
56-233, gnl|mm7|chr2 (130426876-130426995) |
|
56-233, gnl|Mm7|chr2 (130427073-130426884) |
|
56-233, gnl|monDom2|scaffold_10 (49134579-49134684) |
|
56-233, gnl|oryCun1|scaffold_200443 (165598-165479) |
|
56-233, gnl|panTro1|chr21 (3138730-3138834) |
|
56-233, gnl|rheMac2|chr10 (36539241-36539345) |
|
56-233, gnl|rn3|chr3 (118220589-118220692) |
|
56-233, gnl|tetNig1|chr10 (12142143-12142226) |
|
56-233, gnl|xenTro1|scaffold_1461 (96369-96269) |
| |
|
507-684, gnl|bosTau2|chr13 (34593172-34592995) |
|
507-684, gnl|Hg17|chr20 (3157660-3157483) |
|
507-684, gnl|Mm7|chr2 (130426260-130426083) |
